Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739845.1_202016-09-
21] 402 sequences; 12,098,161 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq12 163 7e-35
seq10 149 1e-30
seq11 138 3e-27
seq9 132 1e-25
>seq12
Length=1020006
Score = 163 bits (180), Expect = 7e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||||||| || || |||||||| || || || |||||||| || || |||
Sbjct 60738 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 60797
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || ||||||||||||||||| || || || ||||| || | || |||||||| |||
Sbjct 60798 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 60857
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || ||||| || | || || || || | ||||||| || |||
Sbjct 60858 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 60917
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | ||| || || ||||| || | || || || || ||||||||
Sbjct 60918 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 60967
Score = 140 bits (154), Expect = 7e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || || |||||||| ||||| || || |||||||| ||||||||||| || ||
Sbjct 60315 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCG 60374
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | || || || || ||||| || ||||| || || ||||| || | ||
Sbjct 60375 GCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 60434
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || || || ||| |||||||| || ||||||||||| || |||||
Sbjct 60435 ACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTC 60494
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| || |||||
Sbjct 60495 TTGACAAAAATTTGCAT 60511
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| || || || || |||||||| | ||||||||||||||||| || || ||
Sbjct 60543 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCG 60602
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | |||||||||||| ||||| || ||||| || ||||| || || | ||
Sbjct 60603 GCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTA 60662
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || ||| | ||| ||||||| || || || ||||| || | ||
Sbjct 60663 ACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTC 60722
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 60723 TTAACAAAGATCTGCAT 60739
Score = 125 bits (138), Expect = 2e-23
Identities = 152/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|||| |||||||| || || || || ||||| || | ||||||||| ||||| | |||
Sbjct 461652 TGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGC 461593
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| |||||||| || | || ||||| ||||| || || ||||| || || || |||||
Sbjct 461592 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTG 461533
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || ||||| || | || || || ||| || || || |||||||||||||| ||
Sbjct 461532 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTT 461473
Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563
| || || || || || ||||| |||
Sbjct 461472 AAAGTCTTGACGAAAATTTGCATCTTG 461446
>seq10
Length=744066
Score = 149 bits (164), Expect = 1e-30
Identities = 376/564 (67%), Gaps = 26/564 (5%)
Strand=Plus/Plus
Query 268745 TACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTA 268804
||||| | |||| |||||||| ||||| | |||||| | ||| ||||| | || |
Sbjct 387917 TACAAGCGTGCCGAAGCTTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATC 387976
Query 268805 ATAGATTGGAAAAATTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCG 268861
|| ||||| || || ||| |||| || ||| || || || |||||||
Sbjct 387977 CATGACTGGAACAACAGAATGAACGAGAACGAGAGATTTTTCATTTCCAGAGTTCTTGCC 388036
Query 268862 TTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAG 268921
||||| || | | ||| ||||| ||||| ||||| | || || || |||| ||
Sbjct 388037 TTTTTCGCCGCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAA 388096
Query 268922 GTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCAT 268981
|| || ||||| || || | |||| ||||| ||||| || || |||||||||||
Sbjct 388097 GTCCAAATTCCAGAGGCAAAGAGTTTCTACGGTTTCCAAATCATGATTGAAAATATTCAC 388156
Query 268982 TCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAA-G 269040
|| || | ||| | || || ||||| || || | || | ||||||| |
Sbjct 388157 TCTGAAACTTACTCCTTGTTGATCGATACCTACATCAAGGAC-----CCTAAAGAAAGTG 388211
Query 269041 ACTATTTTCTTCTATGAGA-----ACTAT----GGACTGTGTGAGaaaaaaaTCTGAATG 269091
| | | || ||| ||| | || || | | | ||||||| | |||||
Sbjct 388212 AAT-TCTTGTTCAATGCCATTCACACCATCCCAGAAATCGGTGAGAAGG----CCGAATG 388266
Query 269092 GGCTCTGAAATGGATAAACGATAGCG-CGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGC 269148
|||| | | |||||| | || | |||||| || ||||| ||||||| |||||
Sbjct 388267 GGCTTTAAGATGGATTCAAGACGCTGACGCCTTGTTTGGTGAAAGACTAGTTGCCTTTGC 388326
Query 269149 CGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAG 269208
| | | |||||| | || || || || || |||||| | || || |||||||| || ||
Sbjct 388327 CTCCATTGAAGGTGTCTTTTTCTCCGGTTCCTTTGCCTCCATTTTCTGGTTGAAAAAGAG 388386
Query 269209 AGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACA 269268
||| | ||||| || ||||| || || ||||||||||| | || ||||||||||| ||
Sbjct 388387 AGGTATGATGCCCGGTTTAACCTTTTCCAACGAATTGATCTGTAGAGACGAAGGTTTGCA 388446
Query 269269 CTGCGACTTCGCTTGTTTATTATT 269292
| |||||| || || || || ||
Sbjct 388447 CACCGACTTTGCATGCTTGTTGTT 388470
>seq11
Length=646997
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || | |||||| || ||||| || || || || ||||||
Sbjct 619636 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 619695
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||||||||||||||||||| | ||| || |||||||| || | || ||||| |||||
Sbjct 619696 GATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 619755
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || || ||||| | || ||||| || | ||| || || |||
Sbjct 619756 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCA 619815
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535
|| || | || || |||||||||||
Sbjct 619816 ACTTCCAAAGTGATGGTCTTACCAGT 619841
>seq9
Length=438567
Score = 132 bits (146), Expect = 1e-25
Identities = 162/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || | |||| || || || |||||||| ||||| || ||||||
Sbjct 74964 ATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA 74905
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | |||||||||||||| | ||| || |||||||| || | || ||||| |||||
Sbjct 74904 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 74845
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||||| || ||||| || | || || || |||
Sbjct 74844 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 74785
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
|| || | || || ||||||||||| | || || |||||
Sbjct 74784 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 74744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151392469578616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |