Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739845.1_202016-09-
21] 402 sequences; 12,098,161 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq11 145 2e-29
seq9 143 5e-29
seq12 138 2e-27
seq10 89.7 1e-12
>seq11
Length=646997
Score = 145 bits (160), Expect = 2e-29
Identities = 167/225 (74%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||| ||||||||||| | | || || ||||||||||| | || || ||| |
Sbjct 619628 GTTCAATGATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGT 619687
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || ||||||| |||| | || |||||||| |||||||||||||| ||||| ||||
Sbjct 619688 TGTAGTCAGATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTT 619747
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
| |||||||| || ||||| || ||||| || || || ||||| || | || |
Sbjct 619748 GGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAG 619807
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 192523
| ||||| ||||| | ||| ||||| |||||||| || || ||||
Sbjct 619808 AAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAA 619852
>seq9
Length=438567
Score = 143 bits (158), Expect = 5e-29
Identities = 169/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||| ||||||||||| | | || ||||| || ||||| | ||||| || |
Sbjct 74972 GTTCAATGATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGT 74913
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || ||||| || |||| | || |||||||| |||||||||||||| ||||| ||||
Sbjct 74912 TGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTT 74853
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
| |||||||| || ||||| || ||||| || || || ||||| |||| || |
Sbjct 74852 GGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAG 74793
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527
| ||||| ||||| | ||| ||||| |||||||| || || || | |||
Sbjct 74792 AAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 74744
>seq12
Length=1020006
Score = 138 bits (152), Expect = 2e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || || |||| ||||| || || ||| || || || ||
Sbjct 461677 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 461618
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| |||| |||| |||||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct 461617 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 461558
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| || ||||| || || || ||||| |||| || || ||||| ||
Sbjct 461557 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 461498
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||| || ||||| || ||||| ||||| || || | || || ||||| ||
Sbjct 461497 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 461447
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | || || || || | ||||| || || ||| || || |||
Sbjct 60510 ATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA 60569
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| || |||| | || || | || ||||| |||||||| || ||||||||||| ||
Sbjct 60570 GACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGA 60629
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || || || ||||| || || ||| || | || || |||||
Sbjct 60630 GGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCA 60689
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| |||| ||| ||||||||||| || || || |||| ||| ||||||||
Sbjct 60690 ACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 60739
Score = 120 bits (132), Expect = 6e-22
Identities = 171/240 (71%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| || | || || | |||||| || | ||| || || || ||||||
Sbjct 60738 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 60797
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | |||| | || || | || ||||| |||||||| ||||| |||||||| ||
Sbjct 60798 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 60857
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| ||||| || || || || | ||| || |||||
Sbjct 60858 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 60917
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT--TTTATTAG 192544
||||| | || ||||||||||| || || || || | || |||||||| | ||||||
Sbjct 60918 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 60977
>seq10
Length=744066
Score = 89.7 bits (98), Expect = 1e-12
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 49821 AAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTT 49880
|| |||||||| || || || ||||| ||||| ||| | || ||||| || ||| |||
Sbjct 388464 AAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTT 388405
Query 49881 AATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAG 49940
|| || ||||| | ||||||||||| | ||| || || || ||||| || || ||
Sbjct 388404 AAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAA 388345
Query 49941 AATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCT 50000
|| | ||| || | | ||||| || | || |||| | ||||||| | | | |||
Sbjct 388344 AAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCT 388285
Query 50001 AATATCCAATTTATAGCCCAATCTGCTTT 50029
||||| ||| |||||| || || ||
Sbjct 388284 TGAATCCATCTTAAAGCCCATTCGGCCTT 388256
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984474929312700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |