Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739935.1_202016-09-
21] 422 sequences; 12,322,823 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq12 118 9e-22
seq407 104 2e-17
seq9 84.2 2e-11
>seq12
Length=1042995
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|| |||||||| ||| |||| || || || || || || |||||| ||| ||| |
Sbjct 490523 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 490582
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
| || || | | | || ||||| || || || || |||||| | || ||
Sbjct 490583 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 490642
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
||||||||| | |||||||| || || |||||||||||| | |||| || |||| |||
Sbjct 490643 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 490702
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || ||||||||||||||||| ||| |||| || |||| |||| ||
Sbjct 490703 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 490752
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || || | || || ||||| || |||||||| || || ||| || |
Sbjct 59814 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 59755
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| ||| | | | | ||| ||||| || || |||||| | || |||||||
Sbjct 59754 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 59695
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|| || | |||||||| || || || | ||||| | ||| || | || |||||
Sbjct 59694 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 59635
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| ||||||||||||||||||||| ||||||| |||| |||| ||
Sbjct 59634 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 59588
>seq407
Length=958
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| ||||||| | || || || || || ||| || ||| | |
Sbjct 746 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 687
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | |||| |||||| |||||||||||| | || ||||||
Sbjct 686 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 627
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|| ||| | || ||||| || || ||| | |||||| | ||| || | || |||||
Sbjct 626 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 567
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| ||||||||||||||||||||| ||||||| |||| |||| ||
Sbjct 566 ATCCAAAAGGAATCTACTCTTCACCTGGTGTTGAGATTGAGAGGTGG 520
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| |||| ||| |||| || || || || ||| || ||| | |
Sbjct 518 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 459
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | | ||| ||||||| || || |||||| | || ||| ||
Sbjct 458 GACACTATTGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 399
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | || ||||| || |||||| | |||||| | ||| || | || ||||||
Sbjct 398 CAAAGATTGATTTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 339
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
||||||||||| || ||||||||| | || ||
Sbjct 338 ATTCAAAAGGAGTCCACTCTTCACCTCGTCTT 307
>seq9
Length=433989
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 25048 TCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTGGCCG 25107
|||| || ||||| || || ||||| || ||| ||| | | || || | | |
Sbjct 68132 TCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACA 68191
Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167
|| ||||| ||| ||| || || |||||| | || || ||||||||| | ||||
Sbjct 68192 ATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 68251
Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227
|||| || || ||||||||||| | ||| || | || ||||| |||||||| ||||
Sbjct 68252 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAAT 68311
Query 25228 CTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
| ||| | ||| | || || |||| |||| ||
Sbjct 68312 CCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 68345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410794687220708
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |