Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739935.1_202016-09- 21] 422 sequences; 12,322,823 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq407 91.5 9e-14 seq12 86.0 4e-12 seq9 82.4 5e-11 >seq407 Length=958 Score = 91.5 bits (100), Expect = 9e-14 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | |||||||| || | || || || ||||| || ||||| ||||| Sbjct 519 ACCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 578 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | || || | |||||| ||| ||| || || | || || |||| || Sbjct 579 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 638 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || |||||||| || ||| ||| || | | ||| |||||| | || ||| Sbjct 639 GATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 698 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || ||||| || || || || |||||||| |||||||||||||| Sbjct 699 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 746 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/216 (69%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | ||||||||||||||| || |||||||| || || || |||||||| Sbjct 747 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 806 Query 33202 CAAATTGAGTT----GGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257 || | ||| ||| |||| |||||| || ||| || || | ||| || || | Sbjct 807 CA----GCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTG 862 Query 33258 TGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317 || || ||||| || || ||| ||| || | | ||| |||||| | || Sbjct 863 GAGGAATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATT 922 Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTT 33353 ||| || || ||||| || || || || ||||||| Sbjct 923 CAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTT 958 >seq12 Length=1042995 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200 |||| ||||| || | ||| ||||| || | || || || ||||| || ||||| || | Sbjct 490754 CACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGG 490695 Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260 ||||| | || ||||||||||| ||| ||| || || | ||| ||||| | | Sbjct 490694 ACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 490635 Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320 | || ||||| || || ||| || || | | ||| ||||| | || || Sbjct 490634 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 490575 Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 | ||||| || || || || || || | ||| || |||||||||||||| || Sbjct 490574 CTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 490523 >seq9 Length=433989 Score = 82.4 bits (90), Expect = 5e-11 Identities = 150/220 (68%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | ||| || || ||||| || || |||||||| || ||||| ||||| Sbjct 68346 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 68287 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | ||| ||||||||||| ||| ||| || || | ||| ||||| | || Sbjct 68286 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 68227 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || ||||| || || |||| || || | | ||| ||||| | || ||| Sbjct 68226 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 68167 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAA 33361 |||| ||| || || || || || | ||| || || ||| Sbjct 68166 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 68127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318775960486956