Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739935.1_202016-09- 21] 422 sequences; 12,322,823 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq9 104 2e-17 seq12 98.7 8e-16 seq407 89.7 4e-13 >seq9 Length=433989 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | |||||| ||||| || | || |||||||||||||||||||| || Sbjct 68348 ATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA 68289 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | | ||||| | ||| |||||||| |||| | | |||||||| || Sbjct 68288 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 68229 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||||||| || | | |||| ||||| | ||||| Sbjct 68228 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 68169 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374 || |||| || | || || || |||| ||| || |||||| Sbjct 68168 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 68127 >seq12 Length=1042995 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | ||| || | || | ||||| || || || || |||||||||||||| Sbjct 59813 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 59872 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | | ||||| || || ||||| || |||| | | ||||| || ||| Sbjct 59873 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 59932 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 || || ||||| ||||| ||| ||| | ||| | | || | ||| |||| ||||| Sbjct 59933 GGGATACCTTCCTTGTCTTGAAT-TTTCGACTTAACGTTGTCGATGGTATCGGAAGATTC 59991 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| ||||||| ||| || || ||||||||||| Sbjct 59992 AACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 60042 >seq407 Length=958 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 114168 CTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAA 114227 ||||| || | || | || || || |||||||| ||||| || || || | | | Sbjct 304 CTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 363 Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 ||||| ||||||||||| || | || | | || ||||| |||||||| ||||| ||| Sbjct 364 TCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 423 Query 114288 TCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 || ||| ||||| ||| | | |||| ||||| | ||||| || || | ||| | Sbjct 424 TCTTGAAT-TTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTAT 482 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || ||||| || || || ||||| ||||| Sbjct 483 AGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420132239196264