Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739935.1_202016-09-
21] 422 sequences; 12,322,823 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq407 140 3e-28
seq12 123 2e-23
seq11 84.2 2e-11
seq5 82.4 7e-11
>seq407
Length=958
Score = 140 bits (154), Expect = 3e-28
Identities = 162/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||||||| || || || || |||||||||||||| || || || | |||| || |
Sbjct 532 CTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCA 591
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || | ||| || || || | ||||||| || || ||||| || || |||||||||
Sbjct 592 TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTA 651
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||||||||| ||||| || | || | ||||||||||| || || || || || |
Sbjct 652 TCTTGAATTTTACTTTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 710
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || ||||||||||| || |||||||||||
Sbjct 711 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 746
Score = 114 bits (126), Expect = 1e-20
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184
|||||| || || || || || || |||||||| ||||| || || | ||| ||
Sbjct 303 CCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACC 362
Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244
||| || | |||||| || || | ||||||| ||||||||| || ||||| ||||| ||
Sbjct 363 ATCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTT 422
Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303
||||||| |||||| | | || | || | ||||| ||||| || || || || || |
Sbjct 423 GTCTTGAA-TTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTA 481
Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || || || |||||||||||
Sbjct 482 TAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 518
Score = 105 bits (116), Expect = 6e-18
Identities = 145/200 (73%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||||||| | ||||| ||| || || || || || |||||||| | ||| ||
Sbjct 760 CTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCG 819
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||| ||| || || || | ||||||| ||| || || || ||||| ||||| ||
Sbjct 820 TCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTG 879
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||||||||| ||||| || | || | ||||||||||| || || || || || |
Sbjct 880 TCTTGAATTTTACTTTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 938
Query 45305 CGTTTTGCCGGTTAGAGTTT 45324
|| || || ||||||||||
Sbjct 939 AGTCTTCCCTGTTAGAGTTT 958
>seq12
Length=1042995
Score = 123 bits (136), Expect = 2e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || || || |||||||||||||| || || ||| | ||| || |
Sbjct 490740 CTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCA 490681
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 490680 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 490621
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | ||||| ||||| || ||||| || ||||
Sbjct 490620 TCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATA 490561
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || ||||||| ||| || || ||||||||||||
Sbjct 490560 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 490525
Score = 109 bits (120), Expect = 5e-19
Identities = 156/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184
|||||| || || || || || || |||||||| ||||| || || | ||| ||
Sbjct 59371 CCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACC 59430
Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244
||| || | ||| || || || | ||||||| ||||||||| || ||||| ||||| ||
Sbjct 59431 ATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTT 59490
Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303
||||||| |||| | | | || | || | ||||| ||||| || || || || || |
Sbjct 59491 GTCTTGAA-TTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTA 59549
Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || || ||||||||||||||
Sbjct 59550 TAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 59586
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
||||| | ||| ||||| | || || ||||| || || || ||||| | ||| ||
Sbjct 59825 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 59884
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
|| || | || || || || | ||||||| ||| || || || || || |||||
Sbjct 59885 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 59944
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
|| ||||||| |||| | | | || | || | ||| |||||||| || ||||| | ||
Sbjct 59945 TTGTCTTGAA-TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGT 60003
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| ||||| | ||| || || ||||| |||||
Sbjct 60004 TATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 60042
>seq11
Length=684821
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | ||| | || |||||||||||||| || || || | ||| ||
Sbjct 637824 CTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCG 637883
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||| ||
Sbjct 637884 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 637943
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | |||||| ||||| || ||||| | ||| |
Sbjct 637944 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATG 638003
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331
|| || || || | ||| || || ||
Sbjct 638004 GTCTTACCAGTCAAAGTCTTAACGAA 638029
>seq5
Length=558422
Score = 82.4 bits (90), Expect = 7e-11
Identities = 200/303 (66%), Gaps = 0/303 (0%)
Strand=Plus/Plus
Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900
|||| |||||||| | ||||| || ||| ||||| || |||| | | |
Sbjct 293494 TACAGTTATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAA 293553
Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960
|| ||||||||| |||||| | | ||| | ||||| ||||| | ||||| | ||
Sbjct 293554 GTGGCCGAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAGAGAT 293613
Query 122961 ATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGT 123020
||||| || ||||| || | |||||||||| ||||| ||| || ||||| |
Sbjct 293614 ATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCT 293673
Query 123021 CCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACC 123080
|| || |||||| ||||| || ||||| |||| || ||||| ||| | ||
Sbjct 293674 CCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCC 293733
Query 123081 TTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCC 123140
|| || ||| ||| || || || || || ||| || || || |||||||||
Sbjct 293734 ATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCC 293793
Query 123141 AAA 123143
|||
Sbjct 293794 AAA 293796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452000815683120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |