Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739935.1_202016-09- 21] 422 sequences; 12,322,823 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq12 154 3e-32 seq407 145 2e-29 seq9 140 8e-28 seq11 134 3e-26 >seq12 Length=1042995 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||||||||||||||||||||| ||||| || || || |||| || || || |||||||| Sbjct 59377 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 59436 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 || ||||| || || || || | | ||| ||||| ||||||| ||||||||||| || Sbjct 59437 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 59496 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 || || || ||||| || || |||||||| ||||||||| || || || ||||| Sbjct 59497 AATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTT 59556 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| ||||| | ||||| Sbjct 59557 ACCTGTCAGTGTCTTGACAAAAATTTGCAT 59586 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||||||||| || || ||||||||||| || || | | ||| || || ||||| ||||| Sbjct 59611 GTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTG 59670 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || ||||| | | ||||| || ||||| | ||||||||||||||||| || Sbjct 59671 CTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTT 59730 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || ||||| ||||| ||||| ||| ||||||||| | |||||| || || || || Sbjct 59731 CGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGT 59790 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | |||||| ||||| | |||||| Sbjct 59791 CAAAGTCTTAACAAAGATCTGCAT 59814 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| ||||| || || ||||||||||| || || | | || || || Sbjct 490741 TCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 490682 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || ||||| | | |||||||||||| |||| |||||||| Sbjct 490681 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 490622 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || || || || || |||||||| |||||| || || || || Sbjct 490621 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAAT 490562 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || | |||||| || || | ||||| || Sbjct 490561 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 490523 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 || ||||| ||||| || | |||||||| || || ||||| ||||| | || || || Sbjct 59825 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 59884 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || ||||| |||||||| || || ||||| | | |||||| || ||||| | |||||| Sbjct 59885 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 59944 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| || || || || ||||| |||||||| || || |||||| || | || Sbjct 59945 TTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTT 60004 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || | |||||| || || | |||||| Sbjct 60005 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 60042 >seq407 Length=958 Score = 145 bits (160), Expect = 2e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| ||||||||||||||||| ||||| || || || |||| || || || |||||||| Sbjct 309 GACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 368 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 || || || || || || || | | ||| ||||| ||||||| ||||||||||| || Sbjct 369 TAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 428 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 || ||| || ||||| || || |||||||| ||||||||| || || || ||||| Sbjct 429 AATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTT 488 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| || || | ||||| Sbjct 489 ACCTGTCAGTGTCTTGACGAAAATTTGCAT 518 Score = 125 bits (138), Expect = 2e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || |||||||| || ||||||||||| | || || || || |||||||| ||||| || Sbjct 778 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 837 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || || || | | |||||| || ||||||| ||||||||||| || || || ||| Sbjct 838 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTG 897 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 ||||| || || ||||| || ||||||||| || || || ||||| || || ||||| Sbjct 898 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGT 956 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||||||||| || || ||||||||||| || || | | ||| || |||||||| Sbjct 538 ACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCT 597 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 || ||||| || || || || | | ||||| || ||||| | ||||| || || || Sbjct 598 AGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGA 657 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 || || ||| ||||| || || ||||| || ||||||||| || || || ||||| Sbjct 658 ATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTC 717 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || || | ||||| Sbjct 718 CCTGTTAGAGTTTTGACGAAAATTTGCAT 746 >seq9 Length=433989 Score = 140 bits (154), Expect = 8e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| | |||||| |||||||| ||||| || || | | ||| || || Sbjct 68334 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 68275 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||||| ||||| || || ||||| | | |||||||||||| || | |||||||| Sbjct 68274 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 68215 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || |||||| || || || || || |||||||| |||||| || | |||||| Sbjct 68214 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 68155 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | |||||| ||||| Sbjct 68154 GGTCTTACCAGTCAAAGTCTTGACAAA 68128 >seq11 Length=684821 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | || | |||||| || ||||||||||| || || | || || || || Sbjct 637823 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 637882 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||||| ||||| || || ||||| | | |||||||||||| || | |||||||| Sbjct 637883 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 637942 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || || || || ||||||||||| |||||| || | |||||| Sbjct 637943 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 638002 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | |||||| || || Sbjct 638003 GGTCTTACCAGTCAAAGTCTTAACGAA 638029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159145732610030