Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739965.1_202016-09- 21] 416 sequences; 12,268,826 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5 363 2e-95 seq10 223 5e-53 >seq5 Length=560823 Score = 363 bits (402), Expect = 2e-95 Identities = 1339/2073 (65%), Gaps = 47/2073 (2%) Strand=Plus/Minus Query 78714 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 78772 |||| || |||||||| | ||| ||||| | || || | | ||||||||| || || | Sbjct 301431 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 301372 Query 78773 TTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 78832 | | || |||||||||| ||||||||||| |||||||| | | || | Sbjct 301371 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 301312 Query 78833 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 78892 || | ||||| ||| ||| |||||| || || | | || || ||||| | Sbjct 301311 GTAAGAACAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCATGT 301252 Query 78893 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 78951 | ||||| |||||||||| ||||||||||| ||| || || || || | ||| |||| | Sbjct 301251 TAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCTTGT 301193 Query 78952 GGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCT---TGATC 79005 |||| |||| || | |||||||| ||| | || ||||| || || | || Sbjct 301192 GGAACATTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTCATA 301136 Query 79006 TCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 79065 | |||| ||| | | || || | | || | | || || || || || Sbjct 301135 CCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGG 301076 Query 79066 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCA 79125 ||||| || || || || | || | ||| ||||| || |||||| | ||||| Sbjct 301075 AATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATTCA 301016 Query 79126 TTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTT 79185 |||| ||||| ||||| | || ||||| || ||||| ||||||| || |||| Sbjct 301015 TTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT 300956 Query 79186 CTAAGACCGTATGATCTGATTTTATCTTTTAG--AGAT-TCCCAATCCCAAAGATCAGAC 79242 |||| ||| ||| | | || |||||||| || | ||||||||||| | | | Sbjct 300955 CTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCGTAG 300899 Query 79243 GGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTAT 79302 || | ||| | |||| | ||||| ||||| | | ||| |||||| | | Sbjct 300898 GGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAA 300839 Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362 ||||| || || || ||||| | |||| ||||||| || || | | | | |||| Sbjct 300838 GTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAA 300779 Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422 || ||||| || || | |||| || | ||||| ||||||||| || | Sbjct 300778 ATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGT 300719 Query 79423 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 79482 || || || || | ||| || | ||||||||||| | | | || |||||||||||| || Sbjct 300718 AACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATA 300659 Query 79483 TTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTC 79542 || || || |||||| || ||| || |||||| ||| || | | | || | ||| Sbjct 300658 TTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATTA 300599 Query 79543 C---TGACTATT-----ACTTTGACCACATCCTTT--AGTT---TGAGAAAATCAAATCG 79589 | | || | | | ||| | || ||| |||| || | || || | | Sbjct 300598 CGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCA 300539 Query 79590 TCCATCTA--TTACAAACA-TGTTC--AACGCGACAGATGCCAGATTACAAACGGCTACC 79644 ||| | || ||| | || | || || || || |||| |||||||| || Sbjct 300538 TCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTT 300479 Query 79645 TCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCT 79704 |||| | | | | |||| | |||||| ||| | ||| |||| ||| ||| Sbjct 300478 TCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACACCT 300419 Query 79705 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCA 79764 || |||| ||||||| ||| ||||||| |||||||| |||| || ||| || |||||| Sbjct 300418 AAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCA 300359 Query 79765 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTG 79824 |||||| | |||| ||| | ||| | | ||| | | | || || || || ||| Sbjct 300358 GTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGTCTTA 300302 Query 79825 TATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCG 79884 | |||| | ||||| | ||||||| || |||||||| || || |||| Sbjct 300301 CCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCG 300242 Query 79885 TCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGT 79944 ||| |||||| | ||| | | || | ||| |||| || | || || Sbjct 300241 CTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGC 300182 Query 79945 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCG 80004 ||||| || |||||||||||||| ||||| || | |||||| | | | ||||| Sbjct 300181 TTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCT 300122 Query 80005 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 80064 || || ||||| ||| ||| | || | | ||||||| |||||| ||||||| | Sbjct 300121 TTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGG 300062 Query 80065 TATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 80124 || | ||| | | || |||| ||| || || ||||| || | || | || |||||| Sbjct 300061 TAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTGTTA 300002 Query 80125 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAG 80184 || |||| | | ||| ||||| | ||| || || ||||| || || || | || || Sbjct 300001 TTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAA 299942 Query 80185 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 80244 ||| | | |||||| ||| || |||||| || || || || |||| || || Sbjct 299941 GAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATC 299882 Query 80245 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGT 80304 || || ||| || || || || || || ||||| || || || ||||| || Sbjct 299881 AAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACC 299822 Query 80305 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 80364 | ||||| |||||||| | ||| || ||||| || || || ||||| ||| Sbjct 299821 AAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCG 299762 Query 80365 TGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCAT 80424 || ||||| ||||| ||||| | || ||||| || | ||| | || ||||| | Sbjct 299761 TGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTA 299702 Query 80425 TGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTA 80484 || || |||| ||||| | ||| | | || || || | ||| | | | | Sbjct 299701 CCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCACTTGGCCG 299642 Query 80485 TTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAA 80543 || ||| | | || ||||| |||||||||||||||||||||||| |||| |||||| Sbjct 299641 TTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTGAAAA 299582 Query 80544 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT 80603 |||| || || | ||| | ||||| | ||||||||| | || | || | || | Sbjct 299581 -TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATAT---T 299526 Query 80604 GGTGATA-CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAA 80660 | || | | | || || || |||| | || ||| | || ||| || || | | Sbjct 299525 GTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGTATTGACGTATCTATA 299466 Query 80661 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGC 80720 | ||| || | || | | |||| ||||| | |||| || |||| ||| || | ||| Sbjct 299465 AAGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAATGGC 299406 Query 80721 TATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 |||||||| |||| |||| ||||||||||| Sbjct 299405 AATTCTGGCCGCTAGGGTGGCGTAATCTGGATG 299373 >seq10 Length=735089 Score = 223 bits (246), Expect = 5e-53 Identities = 592/898 (66%), Gaps = 11/898 (1%) Strand=Plus/Minus Query 49649 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 49708 |||| |||||||| || |||||||| ||| || | |||||||| || ||||| | Sbjct 390907 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 390849 Query 49709 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttt 49768 | || |||| || || |||||||||||||| || || || || || || ||| | Sbjct 390848 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 390789 Query 49769 tAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTT 49828 | || || || | || ||| || ||||| || || | ||| ||||| | | Sbjct 390788 TGTTACCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 390729 Query 49829 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAAT-TCTT-GTTCAAT 49886 || ||||| |||| | |||||| | || | ||||| | |||| ||||||| Sbjct 390728 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAAT 390671 Query 49887 GGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATG 49946 || || || || | ||| | |||| | || ||| | | ||||| Sbjct 390670 TTCCACAGCCTCGGTGACAATTTTTTCAACGATGGCTGGGTCTGGTTTGTTCTTCAAATG 390611 Query 49947 TTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTT 50006 |||| ||| ||||| || ||| ||||| ||| |||||||||| || | |||||| Sbjct 390610 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 390551 Query 50007 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 50066 |||||| || | |||||||| | || | |||||| | ||| || ||||| ||||| || Sbjct 390550 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 390491 Query 50067 CCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC 50126 || || || |||| ||||| | | |||||||||||| ||||| || ||| | ||| Sbjct 390490 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGC 390431 Query 50127 G---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 50183 | ||| || ||||| || |||||| |||||||||| | || || || Sbjct 390430 GTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGT 390371 Query 50184 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 50243 | |||||||| || | | | |||| ||| || || | || ||||||||||| Sbjct 390370 GTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCGATCAA 390311 Query 50244 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 50303 | || |||| || ||||| |||||||| || || || |||||||||| | Sbjct 390310 CAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTT 390251 Query 50304 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCC 50363 ||||| | ||| || ||||| || | || |||| | || |||||||| || || || Sbjct 390250 TGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 390191 Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTT---GGGTGT 50420 |||| || || ||||| || | || || ||| | | ||||| | | Sbjct 390190 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCAT 390131 Query 50421 TAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 50480 | || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || || Sbjct 390130 TCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGA 390071 Query 50481 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACA 50538 || || || || || | |||||| ||||| || | ||| ||||||| |||| Sbjct 390070 AGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 390013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718265065002240