Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739965.1_202016-09- 21] 416 sequences; 12,268,826 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq12 114 1e-20 seq5 82.4 6e-11 >seq12 Length=1057113 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||| | ||| |||| || | ||||| || ||||| || |||||||| | Sbjct 58562 CCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 58621 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | | ||||| || || ||||| || |||| | | |||||||||||| || Sbjct 58622 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 58681 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| |||||||| || || |||| | | | || | |||||| | | |||||| Sbjct 58682 ATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 58741 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||||| ||||||| || || || |||||||| || || ||||||||| Sbjct 58742 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 58789 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 || || || | ||||| ||| || | || | || || || ||||||||||||||||| Sbjct 58331 TTACCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCC 58390 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 || | | | ||||| || ||||||||||| |||| | | || || || || Sbjct 58391 GACAGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGA 58450 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | ||| || || || || || || | | | || | |||||| | | |||| Sbjct 58451 GGAATACCTTCCTTGTCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCA 58510 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| ||||||| || || ||||| || || || || ||||||||| Sbjct 58511 ACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCATA 58561 >seq5 Length=560823 Score = 82.4 bits (90), Expect = 6e-11 Identities = 395/623 (63%), Gaps = 9/623 (1%) Strand=Plus/Minus Query 131636 CCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCT 131695 || || | ||| || |||||||| || | ||| || | ||||| || |||| |||| Sbjct 300199 CCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCT 300140 Query 131696 CTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCC 131755 || || | || ||| |||| | || | | || | ||| || || || || Sbjct 300139 CTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCA 300080 Query 131756 GCATGCCAGGGTTCCAAATACACTGCCATTGCGCC---TTTGCGCTTACCGCCTTGATTA 131812 |||||||| ||||||| || | || | || || | | ||||| || || | | Sbjct 300079 GCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCA 300020 Query 131813 ACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCA 131872 |||| ||| | |||| ||| | || || | ||| || |||||||| | | || Sbjct 300019 ACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCG 299960 Query 131873 TTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCT 131932 || || | |||||| ||| | | | || || || | | || |||||||| Sbjct 299959 TTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCA 299900 Query 131933 CC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCT 131991 || || || ||| || || | || |||| | | |||| || || || || | Sbjct 299899 CCAGCAGT-TTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGA 299841 Query 131992 GTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGCTGA 132051 |||| | ||| | || || || |||||||||| || | | || ||||| Sbjct 299840 GTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATT 299781 Query 132052 AAACAATGTGGGGCTGGCGTGTGTAAAAAGTTTTTTGGCCATGCACCGATACGATTGTAT 132111 ||||| || || |||||| |||||| |||| | ||| | ||||| || || Sbjct 299780 GAACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAA 299721 Query 132112 AGCGGACTCGATATCGCCCAGATGTATGGTCAATGCGACCCGCATG--TACATGTGTTGA 132169 ||| | ||||||||| | || ||| | |||||| | ||| || |||| || Sbjct 299720 AGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGG 299661 Query 132170 ATGCGCTCGGCCGTTTTGCCGTCGATTTTGATCAAATAACCGTTTTCCAAAGTTTTGAAA 132229 | || |||||| || ||||| |||| | | |||||| |||||||||||| ||| Sbjct 299660 A--CGTTCGGCCACTTGGCCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAA 299603 Query 132230 CCAAAATATTTGTATTCATAATC 132252 |||||||| |||| | | |||| Sbjct 299602 CCAAAATAACTGTACTGAAAATC 299580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932245582592