Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739995.1_202016-09- 21] 495 sequences; 12,272,740 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5 271 7e-68 seq9 158 1e-33 seq10 134 1e-26 >seq5 Length=567320 Score = 271 bits (300), Expect = 7e-68 Identities = 1189/1857 (64%), Gaps = 56/1857 (3%) Strand=Plus/Minus Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873 ||||| | || ||||||| ||| ||||| || || || | ||| ||||||||||| Sbjct 299988 GATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCTTCAATCCCTTCTTCCATCCGTAA 299929 Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGA 36933 ||||||||||| || ||||| | || || | || | | ||| || ||| Sbjct 299928 AAATGCATACTTGTTAGTTTACCCATAGTTGGGGCACGTAAGAACAAATTCAAAGAATGA 299869 Query 36934 CTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATC 36993 |||||| ||| | || | ||||||||||| | | ||| ||||| || || Sbjct 299868 GATTGATCAATATAGACAGAACGATCGGCTGCCATGTTAATGATAGTCTTTTGTGAAATT 299809 Query 36994 TCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGAATA 37050 |||||||| || || |||| | || | | | ||| | || | || |||||| Sbjct 299808 TCCCAAACAGTCTTGTATAAGTCCTTCAATTCTTGTGGAACATTTGGTAAGCCTTGAATG 299749 Query 37051 GAACCATTATGT---AACACAATTGTATTCTTT-ATGTCATTATTCCACATATTTCTACT 37106 || ||||| ||| | || | || | ||| || | | || ||| ||| | | Sbjct 299748 GAGCCATTTTGTGTAATCAGA----TACTGTTTCATACCCTCATCCCAAATACCTAAATC 299693 Query 37107 TATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCT 37166 | | || | || || || || || |||||||| || || || ||||| || | | Sbjct 299692 AACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGGAATTCACCGGATAAGACACGACG 299633 Query 37167 TGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGT 37226 | || |||||| ||| |||||| | | ||||||| || |||||||| ||||| Sbjct 299632 GGAGTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGT 299573 Query 37227 AGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAAT-TC 37285 |||||||||||||||||||| || | | |||||| | ||||| | | || || Sbjct 299572 GGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATC 299513 Query 37286 TCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACC-ACATATCATAT 37344 | || || || | | ||||||||| | | || ||||| || || |||||||| | Sbjct 299512 TTTTCTTAAGGTG-TCCCAATCCCACATGCC-GTAGGGTTTTTGGTCCCACATATCAAAC 299455 Query 37345 TGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTA 37404 ||||| ||||||| | || ||||| | | | || || || || |||| | | | Sbjct 299454 TGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGA 299395 Query 37405 GCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTT 37464 |||||||| ||| || ||| | | ||||| ||| || ||||| || ||||| |||||| Sbjct 299394 GCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTT 299335 Query 37465 AATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAA 37524 | | ||||| || ||| |||| | | || | || || ||||| | | Sbjct 299334 AGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGA 299275 Query 37525 CCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACT 37584 || |||||||| | | | || ||||||||| || |||| ||| | || |||| || Sbjct 299274 CCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACA 299215 Query 37585 GGATAATAATTGATATCTATTATTTTATTTAGATTTT---TAAC-----TAGTATTTTC- 37635 || || ||||| ||| || | | | |||| ||| |||| ||| | |||| Sbjct 299214 GGGTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCA 299155 Query 37636 -GTAATTATTCTCAACTTGTC----GAA--CATAAATACGTTATTATTAACAAATT-TAC 37687 |||||| || | || |||| ||| | || | | | | | ||| | | Sbjct 299154 TGTAATTTTT-TGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGAATGC 299096 Query 37688 TC--AACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAA--ATTGT 37743 | || | || || | | ||||| |||||| ||||||| | || | ||| Sbjct 299095 TGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCT--GGAGCTGAGTATTCA 299038 Query 37744 ATAATCTCTGTACAG----AGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGA 37799 | ||| || |||| || || | || | || || || || ||||||| || Sbjct 299037 ACAATTTC---ACAGCATAAGTTTGAT-GACTTGATGACACCTAAGTTTTTTTGATTAGA 298982 Query 37800 TTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTC 37859 |||| | ||||||| ||| || || | | | || || || ||| ||||||| || Sbjct 298981 TTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTC 298922 Query 37860 GATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTA--AtttttttCTTTGTT 37917 | ||| || | |||||| || ||||| ||| | ||| | |||||| | Sbjct 298921 CAAAATGGAATACCATAATTTTTGGGCTTT---GATAGTCTTACCACGACCTTCTTTCT- 298866 Query 37918 TCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACAT 37977 |||| |||||| | ||| || | || | ||||| ||| || ||| | Sbjct 298865 -CGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCT 298807 Query 37978 TCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCA 38037 |||| | | || | ||| ||| || ||| || || | ||| || | |||| Sbjct 298806 GATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCA 298747 Query 38038 GGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTT 38097 || | ||||| |||| || |||||| | | | | ||| || || || ||||| Sbjct 298746 GGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTC 298687 Query 38098 CTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCT 38157 || | | |||||| ||||||||||| ||||||||||| | |||| | | || Sbjct 298686 CTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCA 298627 Query 38158 CCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAAC 38217 || |||||||||| ||| ||||| | || ||| | | |||||||| | | | | | Sbjct 298626 CCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCGGTGTTATTGAAAACACGAATC 298567 Query 38218 ATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGT 38277 ||||| | || ||| ||||| | |||||| |||| | || |||| ||| | | || Sbjct 298566 ATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGA 298507 Query 38278 ATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTT 38337 || ||| || | || || ||||| ||| ||| || || ||||| |||| || Sbjct 298506 ATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTC 298447 Query 38338 AACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGAC 38397 || || || | || || || ||| ||| ||||| || | | | |||||| ||| Sbjct 298446 AAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGAC 298387 Query 38398 ATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTT 38457 |||||||| |||||| ||||| || || || || ||||| || || | || ||||| Sbjct 298386 ATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATATTTT 298327 Query 38458 TCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGA 38517 |||| | ||||| ||||||| || | || ||||| | ||||| || ||||| Sbjct 298326 AGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGT 298267 Query 38518 GATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGA 38577 | || ||||| | | ||||||||| ||| | || | || | | |||| | Sbjct 298266 GCGACTCTCATAATTAAATGTTGTGGATGTTCGGCCACTTGACCGTTGATTCTTAGTAAA 298207 Query 38578 TACGATTTTTCTAATGTTTTTATTCCAAAATAACTATA-TGAATAATCTCTATCGTA 38633 || || ||| || ||||| | ||||||||||| || |||| ||||||| || || Sbjct 298206 TAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTGAA-AATCTCTGTCATA 298151 >seq9 Length=430135 Score = 158 bits (174), Expect = 1e-33 Identities = 414/629 (66%), Gaps = 2/629 (0%) Strand=Plus/Plus Query 38006 CATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTT 38065 |||| | || || |||| ||| || | |||||| | ||||| |||| || |||||| Sbjct 232568 CATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTC 232627 Query 38066 TGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAG 38125 | | | | |||||| || || | ||||| | | ||| ||||| ||||| | Sbjct 232628 TTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCTG 232687 Query 38126 CGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAA 38185 | |||||||| || | ||| | | || || ||||| || | ||| ||||| | | Sbjct 232688 CATGCCATGGCTCCAAGAAAAGGGCGAAGGCACCAGGTCTCTTGTTACCACCCTGGTCCA 232747 Query 38186 TATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGT 38245 ||| | | || ||||| | | | | |||||| | | || || || | |||| Sbjct 232748 CATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGT 232807 Query 38246 TTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCAC 38305 | |||| | ||||||| ||| | | || || || | || | || | |||| Sbjct 232808 TGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCAC 232867 Query 38306 CTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGT 38365 ||||| ||| || || | ||| |||| ||| || |||||| | |||||||| ||| || Sbjct 232868 CTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGT 232927 Query 38366 CATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAA 38425 ||||||| || | | || ||||| |||||||||||| ||| || || ||||| | Sbjct 232928 CATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGA 232987 Query 38426 ATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTA 38485 |||| || || || || || |||| || || ||||| ||||||| || | | | Sbjct 232988 ATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCA 233047 Query 38486 CATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTC 38545 || || ||||| | || || |||||||| | || | ||||| || ||| || || | Sbjct 233048 CAGATTCGATATCGCTACCATGGATACCTAGCGCCACACGCATTACCAAATGCTGAGGAC 233107 Query 38546 TTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAA 38605 |||| | || | ||| || | || | ||||| || | ||| || | ||| | Sbjct 233108 GTTCTGCCACTTCACCGTTCAGTCTTAGCAAGTACGAACGCTCCAGTGTCTTGAATCCGA 233167 Query 38606 AATAACTATA-TGAATAATCTCTATCGTA 38633 |||| |||| || | |||| |||||||| Sbjct 233168 AATACGTATACTGGA-AATCCCTATCGTA 233195 Score = 93.3 bits (102), Expect = 4e-14 Identities = 410/632 (65%), Gaps = 33/632 (5%) Strand=Plus/Plus Query 36982 TTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT--- 37038 |||||||| || ||||| || ||||| |||| || || | | | ||| | || | Sbjct 231526 TTTTGAGAGATTTCCCAGACGGTTTTGTATAATTCCTTCAATTCTTGTGGCACATTTGGT 231585 Query 37039 AAATGTTGAATAGAACCATTATGTAACACAATTG--TATTCTTT-ATGTCATTATTCCAC 37095 || ||||||||||||||| ||| |||| |||| ||| || || || ||| Sbjct 231586 AAGCCTTGAATAGAACCATTTTGTGT---AATTAGATATTGTTTCATACTATCATCCCAA 231642 Query 37096 ATATTTCTACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAG 37153 ||| | | | | || || | | || | |||||| ||||| || || || |||| Sbjct 231643 ATAC--CCAGGTCGACTAAATCACGTAGTAAATATGGATTAACAACTTGGAATTCACCAG 231700 Query 37154 ATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTA 37213 | | || | | | || || || || |||||| | | ||||||| || | Sbjct 231701 ACAGGACACGACGAGAGTACATGTTTGAGGTCACTGGTTCGAAACATTCATTATAACCAA 231760 Query 37214 ATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAG--AAGGCTATTTCTCAATCC 37271 ||||| || || || || || ||||||||||| || || || | ||||| || || Sbjct 231761 GAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCCAT-AGTCAAAGAG-TTTCTTAACCC 231818 Query 37272 ATGTGTATTAATTCTCTTTTTTA--GTTCATTCCAATCCCATAAATCTGTTGGGTT--CT 37327 |||| || ||| |||| ||| ||| | ||||||||| | | ||| || | Sbjct 231819 ATGTTTAACAATGTCCTTTCTTAAGGTT--TCCCAATCCCACATGCCAAATGGTTTAGCG 231876 Query 37328 TTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCAT 37387 || ||||||||| |||||| |||||| ||| ||||||||| | | | | || || Sbjct 231877 TT--CCACATATCGAATTGTAAAATACCCTTAGAAGCTGGAGAACCTTCAAAAGTAGAAT 231934 Query 37388 AAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTT 37447 | || | ||| || | ||| || | ||| || | |||| || || |||| Sbjct 231935 ATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAAGAGTAGCATGGTAAATAGTTT 231994 Query 37448 CGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCC-CAATAAT 37506 |||| |||||| | |||| ||| ||| |||| | || || | ||| | ||| | Sbjct 231995 CGAAGATTTGTTTGTTTAGAGTTTGAGCTACTTC-CGATTCAAAGGGTAGACGCAACATC 232053 Query 37507 ATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGA- 37565 ||| | ||| ||||||||||| | ||| | | | || |||||||| ||| |||| || Sbjct 232054 ATATAAGTATCGGCCAAACCCTGGATACCAAGAGCAATAGGTCTATGCTTCATATTTGAA 232113 Query 37566 --TCTAGACGATTCTATCACTGGATAATAATT 37595 ||||| | || |||||||| ||||| Sbjct 232114 TTTCTAGCC---TCGGGAACTGGATAGTAATT 232142 >seq10 Length=732157 Score = 134 bits (148), Expect = 1e-26 Identities = 397/602 (66%), Gaps = 24/602 (4%) Strand=Plus/Minus Query 11621 AACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAA 11680 |||| || || ||||| || || |||||||||||||||| || | ||| || ||| Sbjct 389830 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 389771 Query 11681 AATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCA 11740 || ||||| |||||||||| |||| ||||| | ||| || || | ||||| ||||| Sbjct 389770 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 389711 Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCT-T 11796 || || || | || || | | ||||| || |||| |||||| ||| | | | | Sbjct 389710 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 389651 Query 11797 GTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC----ATTG 11852 | || || |||||| || ||||| || || ||| | || ||| | || | Sbjct 389650 GCGTCTTGA-ATCCATCTTAAAGCCCATTCGGCCTTC----TCACCGATTTCTGGGATGG 389596 Query 11853 TTTCTATAGCGTTAAATA--AATGCATTTTTTCTATATTATCTCTTACATATGTATCTAT 11910 | | || || || || | ||| || ||||| || || | | || ||||| || Sbjct 389595 TGTGAATGGCATTGAACAAGAATTCA--CTTTCTTTAGGGTCCTTGATGTAAGTATCGAT 389538 Query 11911 TAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACA 11970 || || || |||| || ||||||||||| || ||||| || || ||||||| Sbjct 389537 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 389478 Query 11971 TCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAAT 12030 |||||||| | || || || | || |||| | || || ||||| ||||| Sbjct 389477 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 389418 Query 12031 ACCATCACTAGATGCAAAAAATGCTAGTA-TATGTTTTATAAAGTATTTTTCGTCTTTAG 12089 ||| ||| || || ||||| || || | | || || || || | |||| | | | Sbjct 389417 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTG-GAAATGAAAAATCTCTCGT-TCTCG 389360 Query 12090 TTAAT----TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAA 12145 || || || | ||| |||| | ||| || || ||||| | ||||||| ||||||| Sbjct 389359 TTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAG 389300 Query 12146 AAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATA 12205 ||| || | | | || || || |||||| ||||| ||||| |||||||||| | Sbjct 389299 AAAGAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGA 389240 Query 12206 AC 12207 || Sbjct 389239 AC 389238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468521901002800