Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739995.1_202016-09- 21] 495 sequences; 12,272,740 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq12 152 3e-32 seq106 129 4e-25 seq9 109 4e-19 >seq12 Length=1062933 Score = 152 bits (168), Expect = 3e-32 Identities = 174/233 (75%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| | ||||||||| |||||||| ||||| ||||| |||||||||| Sbjct 66818 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAG 66877 Query 38149 ACAAAACACGTT----CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 ||| |||| |||| |||| || || |||||||| || | | ||||||||| Sbjct 66878 ACA----GCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCT 66933 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264 | |||| ||||| ||||| |||||| ||| || || | || ||||| | | Sbjct 66934 GGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGAT 66993 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||||| ||||| || |||||||| ||||| || || ||||| |||||||| Sbjct 66994 TCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 67046 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 452135 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 452194 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 452195 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 452229 Score = 116 bits (128), Expect = 2e-21 Identities = 143/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTT----CGTCGTCTAATTGTTTTCCGGC 38182 ||||| ||||| ||||||||||||| |||| |||| |||| || || ||||| Sbjct 67105 TCCTTCTGAATGTTGTAATCAGACA----GCGTTCTACCGTCTTCTAGCTGCTTACCGGC 67160 Query 38183 AAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCAC 38242 ||| || | | ||||||||| | |||| ||||| ||||| |||||| ||| || Sbjct 67161 AAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTAAC 67220 Query 38243 ATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTT 38302 || | || ||||| | ||||||||| ||||| || |||||||| ||||| || || Sbjct 67221 GTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTT 67280 Query 38303 CACGAATATCTGCAT 38317 ||||| |||||||| Sbjct 67281 GACGAAAATCTGCAT 67295 Score = 114 bits (126), Expect = 9e-21 Identities = 170/239 (71%), Gaps = 9/239 (4%) Strand=Plus/Plus Query 38084 ATCA-TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGT 38142 |||| |||||||| ||||| | ||| || | ||||||||| ||||||||||||||||| Sbjct 66584 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 66643 Query 38143 AATCAGACAAAACACGTT----CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGT 38198 | || |||| |||| | || |||| |||||| |||||||| || | | ||| Sbjct 66644 AGTCCGACA----GCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGC 66699 Query 38199 TGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCT 38258 || || | || | ||||| ||||| ||||||| ||| || || | | ||| || Sbjct 66700 TGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCA 66759 Query 38259 CCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | |||||| |||| || ||||| ||||| |||| || || || || || ||||| Sbjct 66760 GAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 66818 Score = 111 bits (122), Expect = 1e-19 Identities = 169/239 (71%), Gaps = 9/239 (4%) Strand=Plus/Plus Query 38084 ATCA-TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGT 38142 |||| |||||||| ||||| | ||| || | ||||||||| ||||||||||||||||| Sbjct 65649 ATCAGTTACCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGT 65708 Query 38143 AATCAGACAAAACACGTT----CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGT 38198 | || |||| |||| | || |||| |||||| |||||||| || | | ||| Sbjct 65709 AGTCCGACA----GCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGC 65764 Query 38199 TGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCT 38258 || || | || | ||||| ||||| |||||| ||| || || | | ||| || Sbjct 65765 TGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCA 65824 Query 38259 CCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | |||||| |||| || ||||| ||||| |||| || || || || || ||||| Sbjct 65825 GAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 65883 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| | ||||||||| |||||||| |||||||| || ||||| |||| Sbjct 65883 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 65942 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| | | || |||| ||| || || ||||| || | | |||||||| | | Sbjct 65943 ACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAG 66002 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||||| || ||| || || || || | | ||| || | ||||| Sbjct 66003 GGATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 66062 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | |||| || ||||| || || || | ||||| ||||| || ||||| Sbjct 66063 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 66111 Score = 105 bits (116), Expect = 4e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||||||||| | ||| ||||| || ||||| |||||||| || ||||| || || Sbjct 498762 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 498703 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 |||| | | || || ||||| || || ||||| || | | |||||| || | || Sbjct 498702 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 498643 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | ||||| ||||| || || ||| ||||| | | ||| || | |||||| Sbjct 498642 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 498583 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 ||| | |||||||| ||||| || || || || ||||| || ||||| || Sbjct 498582 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 498532 Score = 104 bits (114), Expect = 2e-17 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| | |||||||||||| | || ||| || ||||| || ||||||| Sbjct 66111 TACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAG 66170 Query 38149 ACAAAACACGTT----CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 ||| |||| |||| || | ||| || |||||||| || | | ||||||||| Sbjct 66171 ACA----GCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCT 66226 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264 | || | ||||| ||||| |||||| || || || | | ||| || | | Sbjct 66227 GGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGAT 66286 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| |||| || ||||| || || || | ||||| ||||| || ||||| Sbjct 66287 TCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 66339 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| | Sbjct 454123 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 454182 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 454183 GCCAATATTTAGCTTTA 454199 >seq106 Length=554 Score = 129 bits (142), Expect = 4e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| | ||||||||| |||||||| |||||||| || ||||| |||| Sbjct 505 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 446 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| | |||| |||| || || |||||||| || | | |||||||| | | Sbjct 445 ACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAG 386 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| |||||| ||||| ||| || || | || || || ||||| Sbjct 385 GGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAA 326 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| || || |||||||| ||||| || || || || |||||||| Sbjct 325 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 277 Score = 125 bits (138), Expect = 5e-24 Identities = 168/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | | | ||| | ||| | ||| |||||| ||||| |||||||||| Sbjct 277 TACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAG 218 Query 38149 ACAAAACACGTT----CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 ||| |||| |||| |||| || || |||||||| || | | ||||||||| Sbjct 217 ACA----GCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCT 162 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264 | |||| ||||| ||||| |||||| ||| || || | || ||||| | | Sbjct 161 GGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGAT 102 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||||| ||||| || |||||||| ||||| || || ||||| |||||||| Sbjct 101 TCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 49 >seq9 Length=430135 Score = 109 bits (120), Expect = 4e-19 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| | ||| || || || | |||| || |||||||| ||||| |||| Sbjct 66395 TACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAG 66336 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| | |||| || ||||| || || ||||| || | | |||||| || | | Sbjct 66335 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 66276 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| ||||| ||| ||| ||| ||||| | | ||| || | ||||| Sbjct 66275 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 66216 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAA 38308 |||| || || || || ||||| ||||| || || || || Sbjct 66215 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 66176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945179326345