Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740055.1_202016-09- 21] 398 sequences; 12,383,659 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq13 107 2e-18 >seq13 Length=896749 Score = 107 bits (118), Expect = 2e-18 Identities = 319/488 (65%), Gaps = 12/488 (2%) Strand=Plus/Plus Query 154602 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 154661 || ||||| || ||| ||| || |||||||| || |||| | || ||||| ||| | Sbjct 615970 ATTACAGGTTTCGATGGTATTTCTTTACAACCAAATTCAGGTGCTCAAGGTGAATATACT 616029 Query 154662 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 154721 || ||| | |||| | | |||| || | ||| || || | | || || ||| Sbjct 616030 GGTCTGAGGGTAATCAGATCCTACCTGGAAAGCAAAGGTGAAAATCATCGTAACGTGTGT 616089 Query 154722 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAA 154781 || || || | || || ||||| || ||||| ||| ||| | ||||| || | ||| Sbjct 616090 TTAATCCCTGTATCCGCTCATGGTACAAATCCGGCTTCTGCCGCTATGGCGGGTTTAAAA 616149 Query 154782 GTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAA 154841 ||||| |||||| ||| | ||||| |||| | || || |||| || Sbjct 616150 GTTGTTCCTGTCAACTGTTTGCAGGATGGCTCATTAGATCTGGTTGACTTAAAGAATAAG 616209 Query 154842 GCAATCATGAATA-CATTTGAA----CTGTCATGTATTATGATTACATACCCATCTACAC 154896 || |||| | |||| ||| || | | ||||| || || || || || Sbjct 616210 GC-----TGAACAACATTCGAAAGAACTAGCCGCCGTAATGATCACCTATCCTTCCACTT 616264 Query 154897 ATGGTGTATTTGAAACTAACATTAGACA-GATATGTAAGATCGTTCATGACAATGGTGGT 154955 | ||| |||||||| | ||| ||| | ||| | | ||| | ||| |||||| Sbjct 616265 ACGGTTTATTTGAACCAGGCATCCAACATGCTAT-TGATATCATACATTCTTTTGGTGGA 616323 Query 154956 CAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAG 155015 || || ||| | ||||| || ||| | ||||| ||||| || ||| | ||| | || Sbjct 616324 CAAGTCTATTTGGATGGTGCTAATATGAATGCGCAGGTTGGGCTAACTTCACCCAGAGAT 616383 Query 155016 TATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGT 155075 |||||||||||| || || | || |||||||| ||||| | ||||| ||||| ||| Sbjct 616384 CTTGGTGCAGATGTTTGCCACTTGAATTTACATAAGACATTTTCCATTCCTCATGGTGGT 616443 Query 155076 GGAGGTCC 155083 || ||||| Sbjct 616444 GGTGGTCC 616451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579209918416320