Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740095.1_202016-09- 21] 566 sequences; 12,341,989 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq12 154 1e-32 seq9 132 4e-26 seq11 123 2e-23 >seq12 Length=1058984 Score = 154 bits (170), Expect = 1e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||||| || || ||| |||| || || || || ||| | ||| Sbjct 66699 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 66640 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| |||||||||||||| ||||| || || || |||||| Sbjct 66639 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 66580 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||||| || ||| |||||||| || || | || ||||| ||| Sbjct 66579 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 66520 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| || || |||||||| ||| | ||| | ||||| || Sbjct 66519 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTAT 66470 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| | ||||| ||| ||||||| || ||||| ||| | || Sbjct 497798 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCT 497857 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||| ||||| || ||||| || ||| Sbjct 497858 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 497917 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || ||||||||||| || || | ||||| |||||| Sbjct 497918 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 497977 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || |||||||| || || |||| ||||| ||| | ||| | ||||| Sbjct 497978 ATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 498024 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| ||||||| || | || || | ||||| ||| | ||| Sbjct 67155 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 67096 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || || || | || || |||||||||||||| ||||| || || || |||||| Sbjct 67095 GATATCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 67036 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||||| || || | |||||| || || | || ||||||||| Sbjct 67035 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 66976 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 ||||| |||||||| ||||||||| Sbjct 66975 ATTCAGAAGGAGTCCACCTTACAT 66952 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || ||||| || ||| |||| || || || || ||| | || Sbjct 66243 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 66184 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || |||||||||||||| ||||| || || || || || Sbjct 66183 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 66124 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||||| || ||| | ||||| || || | || || ||||| Sbjct 66123 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 66064 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||||||||| || | || | || ||| | ||| ||||||| Sbjct 66063 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGG 66017 >seq9 Length=438475 Score = 132 bits (146), Expect = 4e-26 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 ||||| || ||| |||| || ||| | || ||| | ||||| ||| | || ||| | ||| Sbjct 74968 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 75027 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| ||| ||||||||||| ||||| || ||||| || ||||| | || Sbjct 75028 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 75087 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | || || || |||||||||||| || ||| | || || |||||||||||||| Sbjct 75088 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 75147 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || || || ||| | ||| | ||||| || Sbjct 75148 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTAT 75188 >seq11 Length=646712 Score = 123 bits (136), Expect = 2e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || || ||| |||| || ||| | || ||| | ||||| ||| | || ||| | ||| Sbjct 619630 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 619571 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| || || |||||||| ||||| || ||||| || ||||| | || Sbjct 619570 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 619511 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | || || || |||||||||||| || || | || || |||||||| |||||| Sbjct 619510 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 619451 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||||||||| ||| | || | ||||| || Sbjct 619450 GAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGTAT 619410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434915322952320