Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740115.1_202016-09- 21] 525 sequences; 12,314,708 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq12 105 5e-18 seq366 100 2e-16 seq9 84.2 2e-11 >seq12 Length=1066958 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||||||| || ||||| ||||| || || ||||| || || || ||| Sbjct 495999 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 495940 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | |||| |||||||| || || ||||| ||||| | ||| ||||| | || Sbjct 495939 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 495880 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| || ||| || || ||||| | ||| ||| || | | || || Sbjct 495879 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 495820 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || ||||||||||||||||| || || |||||||| Sbjct 495819 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 495772 >seq366 Length=395 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||||||| ||||||||||| | ||| |||||| ||||| |||||||| Sbjct 96 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 155 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 | | | || |||| ||| || || ||||| ||||| | ||| || || |||| Sbjct 156 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 215 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| || ||| |||||| |||||| | ||| ||| || | | || || Sbjct 216 AATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 275 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || || || || |||| ||| || || || |||||||| Sbjct 276 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 323 >seq9 Length=449166 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||||||| || || || || | ||| ||||||||||| || || || Sbjct 74498 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 74439 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | | || |||||||| || || ||||| ||||| | ||| ||||| | || Sbjct 74438 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 74379 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| || ||| ||| ||| ||||| | ||| ||| || | | || || Sbjct 74378 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 74319 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAA 44112 || | || || || ||||| || |||||||| ||||| Sbjct 74318 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 74280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354775329977700