Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740115.1_202016-09- 21] 525 sequences; 12,314,708 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq366 129 5e-25 seq12 104 2e-17 seq274 93.3 4e-14 seq9 93.3 4e-14 >seq366 Length=395 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| |||||||| || || || || || || ||| | || || || | Sbjct 323 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 264 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || ||| |||||| || || ||||| | || ||||| Sbjct 263 GACACTATTG-ACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCA 205 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | |||| ||| || || ||| | ||||| | | ||| || | |||||||| Sbjct 204 ACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 145 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||| ||||||||||| | ||| |||||||||||||| |||| || Sbjct 144 CATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 97 >seq12 Length=1066958 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||||||||| ||||| || | || || || || |||||| | ||| || || Sbjct 495769 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 495828 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 |||||| || ||||| || || || || || || ||||| | || ||| Sbjct 495829 TCTGACACTATT-GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 495887 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 || |||||| | || | ||| || || ||||| ||||||| | ||| || |||| || Sbjct 495888 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 495947 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| ||||| || |||||| |||| |||| ||||||||| |||| || Sbjct 495948 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 495998 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || | || || |||||||| || | || || ||| | Sbjct 64214 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 64155 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | || || || || ||||| || || ||||| |||| ||||| Sbjct 64154 GACAC-GATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 64096 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || ||| | |||| ||| || || ||| ||||||||| | |||| || | || || || Sbjct 64095 ACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAA 64036 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || |||||| | || |||||||||||||| |||| || Sbjct 64035 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 63988 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||||||||| || || || || || || || ||| | || || || Sbjct 63487 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 63428 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| || ||||| || || |||||| || || ||||| | || || || Sbjct 63427 GACACTATT-GACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 63369 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||| | |||| ||| || || ||| ||||||||| | ||| || | || || || Sbjct 63368 GCAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 63309 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 |||||||| ||||| ||| | || | || ||||| ||| | || || || Sbjct 63308 TATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTAA 63258 >seq274 Length=460 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || | || || |||||||| || | || || ||| | Sbjct 366 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 307 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | || || || || ||||| || || ||||| |||| ||||| Sbjct 306 GACAC-GATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 248 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || ||| | |||| ||| || || ||| ||||||| | | |||| || | || || || Sbjct 247 ACAGAGATTGATTTTTGCCGGTAAGCAACTAGAAGACGGTAGAACCTTGTCTGACTACAA 188 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || |||||| | || |||||||||||||| |||| || Sbjct 187 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 140 >seq9 Length=449166 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 115294 TTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGT 115353 ||||||||| || | || || || ||||| || | ||| || || |||||| | Sbjct 74279 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 74338 Query 115354 TGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGAC 115412 || |||| || || ||| ||| || || ||||| |||| ||| || |||||| Sbjct 74339 TG-ACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGAT 74397 Query 115413 TTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAA 115472 | || | ||| || || ||||| ||||| | | |||| || | || || |||||||||| Sbjct 74398 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAA 74457 Query 115473 AAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||| || ||| | || | || ||||||||| |||| || Sbjct 74458 AAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 74497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425341278463000