Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740115.1_202016-09-
21] 525 sequences; 12,314,708 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq366 125 6e-24
seq12 123 2e-23
seq208 104 2e-17
seq274 96.9 3e-15
seq11 84.2 2e-11
seq5 82.4 7e-11
>seq366
Length=395
Score = 125 bits (138), Expect = 6e-24
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||||||| | ||||| ||| || || || || || |||||||| | ||| ||
Sbjct 109 CTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCG 168
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||| ||| || || || | ||||||| ||| || || || ||||| ||||| ||
Sbjct 169 TCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTG 228
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||||||||| ||||| || | || | ||||||||||| || || || || || |
Sbjct 229 TCTTGAATTTTACTTTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 287
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || ||||||||||| || |||||||||||
Sbjct 288 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 323
>seq12
Length=1066958
Score = 123 bits (136), Expect = 2e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || || || |||||||||||||| || || ||| | ||| || |
Sbjct 495986 CTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCA 495927
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 495926 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 495867
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | ||||| ||||| || ||||| || ||||
Sbjct 495866 TCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATA 495807
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || ||||||| ||| || || ||||||||||||
Sbjct 495806 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 495771
Score = 109 bits (120), Expect = 5e-19
Identities = 156/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184
|||||| || || || || || || |||||||| ||||| || || | ||| ||
Sbjct 63272 CCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACC 63331
Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244
||| || | ||| || || || | ||||||| ||||||||| || ||||| ||||| ||
Sbjct 63332 ATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTT 63391
Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303
||||||| |||| | | | || | || | ||||| ||||| || || || || || |
Sbjct 63392 GTCTTGAA-TTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTA 63450
Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || || ||||||||||||||
Sbjct 63451 TAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 63487
Score = 104 bits (114), Expect = 2e-17
Identities = 118/156 (76%), Gaps = 2/156 (1%)
Strand=Plus/Plus
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||| ||| || || || | ||||||| ||| || || || ||||| ||||| ||
Sbjct 63832 TCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTG 63891
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||||||||| ||||| || | || | ||||||||||| || || || || || |
Sbjct 63892 TCTTGAATTTTACTTTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 63950
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || ||||||||||| || |||||||||||
Sbjct 63951 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 63986
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||||||| | || || || |||||||||||||| || || || | |||| || |
Sbjct 64000 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCA 64059
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || | ||| || || || | ||||||| || || || || || || ||||| ||
Sbjct 64060 TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCTGGAGGGATACCTTCCTTG 64119
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|| || | |||| | | | || | || | |||||||| || || || || | ||| |
Sbjct 64120 TCCTGGA-TTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 64178
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| ||||| | ||| || ||||| || |||||
Sbjct 64179 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 64214
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
||||| | ||| ||||| | || || ||||| || || || ||||| | ||| ||
Sbjct 64474 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 64533
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
|| || | || || || || | ||||||| ||| || || || || || |||||
Sbjct 64534 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 64593
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
|| ||||||| |||| | | | || | || | ||| |||||||| || ||||| | ||
Sbjct 64594 TTGTCTTGAA-TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGT 64652
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| ||||| | ||| || || ||||| |||||
Sbjct 64653 TATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 64691
>seq208
Length=489
Score = 104 bits (114), Expect = 2e-17
Identities = 118/156 (76%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||| ||| || || || | ||||||| ||| || || || ||||| ||||| ||
Sbjct 477 TCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTG 418
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||||||||| ||||| || | || | ||||||||||| || || || || || |
Sbjct 417 TCTTGAATTTTACTTTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 359
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || ||||||||||| || |||||||||||
Sbjct 358 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 323
>seq274
Length=460
Score = 96.9 bits (106), Expect = 3e-15
Identities = 102/132 (77%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269
||||||| ||| || || || ||||| ||||| || ||||||||||| ||||| || |
Sbjct 8 ATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTGA-CGTT 66
Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
|| | ||||||||||| || || || || || | || || || ||||||||||| ||
Sbjct 67 GTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGAC 126
Query 45329 AAAAATTTGCAT 45340
|||||||||||
Sbjct 127 GAAAATTTGCAT 138
Score = 86.0 bits (94), Expect = 6e-12
Identities = 150/216 (69%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||||||| | || || || |||||||||||||| || || || | |||| ||
Sbjct 152 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCG 211
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || | ||| || || || | ||||||| || || || || || || ||||| ||
Sbjct 212 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTCTGTTGATCTGGAGGGATACCTTCCTTG 271
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|| || | |||| | | | || | || | |||||||| || || || || | ||| |
Sbjct 272 TCCTGGA-TTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 330
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| ||||| | ||| || ||||| || |||||
Sbjct 331 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 366
>seq11
Length=651061
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | ||| | || |||||||||||||| || || || | ||| ||
Sbjct 623875 CTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCG 623934
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||| ||
Sbjct 623935 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 623994
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | |||||| ||||| || ||||| | ||| |
Sbjct 623995 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATG 624054
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331
|| || || || | ||| || || ||
Sbjct 624055 GTCTTACCAGTCAAAGTCTTAACGAA 624080
>seq5
Length=569000
Score = 82.4 bits (90), Expect = 7e-11
Identities = 200/303 (66%), Gaps = 0/303 (0%)
Strand=Plus/Plus
Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900
|||| |||||||| | ||||| || ||| ||||| || |||| | | |
Sbjct 299701 TACAGTTATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAA 299760
Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960
|| ||||||||| |||||| | | ||| | ||||| ||||| | ||||| | ||
Sbjct 299761 GTGGCCGAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAGAGAT 299820
Query 122961 ATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGT 123020
||||| || ||||| || | |||||||||| ||||| ||| || ||||| |
Sbjct 299821 ATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCT 299880
Query 123021 CCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACC 123080
|| || |||||| ||||| || ||||| |||| || ||||| ||| | ||
Sbjct 299881 CCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCC 299940
Query 123081 TTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCC 123140
|| || ||| ||| || || || || || ||| || || || |||||||||
Sbjct 299941 ATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCC 300000
Query 123141 AAA 123143
|||
Sbjct 300001 AAA 300003
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452000233729000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |