Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740115.1_202016-09- 21] 525 sequences; 12,314,708 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq12 93.3 4e-14 seq208 87.8 2e-12 seq274 84.2 2e-11 >seq12 Length=1066958 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||||| ||||||||| ||||| || |||||||| || ||| ||| || ||||| Sbjct 64488 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 64547 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || || | || | | || || || |||||||| ||||||||||| ||| || Sbjct 64548 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC-TTGAATTT 64606 Query 133577 TTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | | ||| | | || | || |||| | || || || | || | |||||| |||| Sbjct 64607 TCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGG 64666 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||| || |||||||||||||| Sbjct 64667 TCAAAGTCTTGACGAAAATCTGCAT 64691 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| || ||| |||| || || | || | || ||| || || |||||||| |||||||| Sbjct 63560 GTCTTCTAGCCGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 63619 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||| || ||| | | || | |||||||| || || || || | |||| Sbjct 63620 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 63679 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||| ||||||| ||| || || || |||||||| Sbjct 63680 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 63715 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || || ||||| || || |||| | | ||| || || |||||||| ||||||||| Sbjct 64060 TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCTGGAGGGATACCTTCCTTG 64119 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||| || ||| | | || | |||||||| || || || || | |||| | Sbjct 64120 TCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATG 64179 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| ||||||| ||| || || || |||||||| Sbjct 64180 GTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 64214 >seq208 Length=489 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| || |||||||| || || | || | || ||| || || |||||||| |||||||| Sbjct 250 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 191 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||| || ||| | | || | |||||||| || || || || | |||| Sbjct 190 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 131 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||| ||||||| ||| || || || |||||||| Sbjct 130 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 95 >seq274 Length=460 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| || || ||||| || || |||| | | ||| || || |||||||| |||||||| Sbjct 211 GTCTTCTAGTTGCTTACCGGCAAAAATCAATCTCTGTTGATCTGGAGGGATACCTTCCTT 270 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||| || ||| | | || | |||||||| || || || || | |||| Sbjct 271 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 330 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||| ||||||| ||| || || || |||||||| Sbjct 331 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417627551000