Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740115.1_202016-09-
21] 525 sequences; 12,314,708 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq12 93.3 4e-14
seq208 87.8 2e-12
seq274 84.2 2e-11
>seq12
Length=1066958
Score = 93.3 bits (102), Expect = 4e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||||| ||||||||| ||||| || |||||||| || ||| ||| || |||||
Sbjct 64488 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 64547
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
||| || || | || | | || || || |||||||| ||||||||||| ||| ||
Sbjct 64548 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC-TTGAATTT 64606
Query 133577 TTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| | ||| | | || | || |||| | || || || | || | |||||| ||||
Sbjct 64607 TCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGG 64666
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
||| ||| || ||||||||||||||
Sbjct 64667 TCAAAGTCTTGACGAAAATCTGCAT 64691
Score = 84.2 bits (92), Expect = 2e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
||| || ||| |||| || || | || | || ||| || || |||||||| ||||||||
Sbjct 63560 GTCTTCTAGCCGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 63619
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| ||| || ||| | | || | |||||||| || || || || | ||||
Sbjct 63620 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 63679
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||| ||||||| ||| || || || ||||||||
Sbjct 63680 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 63715
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| || || ||||| || || |||| | | ||| || || |||||||| |||||||||
Sbjct 64060 TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCTGGAGGGATACCTTCCTTG 64119
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| ||| || ||| | | || | |||||||| || || || || | |||| |
Sbjct 64120 TCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATG 64179
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| ||||||| ||| || || || ||||||||
Sbjct 64180 GTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 64214
>seq208
Length=489
Score = 87.8 bits (96), Expect = 2e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
||| || |||||||| || || | || | || ||| || || |||||||| ||||||||
Sbjct 250 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 191
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| ||| || ||| | | || | |||||||| || || || || | ||||
Sbjct 190 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 131
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||| ||||||| ||| || || || ||||||||
Sbjct 130 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 95
>seq274
Length=460
Score = 84.2 bits (92), Expect = 2e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
||| || || ||||| || || |||| | | ||| || || |||||||| ||||||||
Sbjct 211 GTCTTCTAGTTGCTTACCGGCAAAAATCAATCTCTGTTGATCTGGAGGGATACCTTCCTT 270
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| ||| || ||| | | || | |||||||| || || || || | ||||
Sbjct 271 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 330
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||| ||||||| ||| || || || ||||||||
Sbjct 331 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483417627551000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |