Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740205.1_202016-09- 21] 430 sequences; 12,157,731 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq12 116 9e-21 seq318 104 5e-17 seq226 102 2e-16 seq11 100 7e-16 seq331 93.3 1e-13 >seq12 Length=1055664 Score = 116 bits (128), Expect = 9e-21 Identities = 153/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || |||||||| || |||||||||||||| |||| |||||||| |||||||| | Sbjct 493594 CAAG-TGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCA 493536 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | || || ||||| | | || |||||||| ||||| | Sbjct 493535 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGA 493476 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | |||| ||| || ||||| || |||||||| || | Sbjct 493475 TCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTAC 493416 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || | |||||| ||||| | ||||| || Sbjct 493415 CGGTTAAAGTCTTGACGAAAATTTGCATCTT 493385 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || |||||||||||||| || | || ||||| |||||||||| Sbjct 62745 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTA 62803 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || || || | ||||| || |||| | ||| ||||| || ||||||| Sbjct 62804 GTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAA 62863 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | |||| ||| || || || || || ||||| || | Sbjct 62864 TCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCC 62923 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || ||||| || ||||| | ||||| Sbjct 62924 CTGTTAGAGTTTTGACGAAAATTTGCAT 62951 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || |||||||||||||| || | || ||||| ||| |||||| Sbjct 62312 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCACCTTCTA 62370 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || || || | ||||| || |||| | ||| ||||| || ||||||| Sbjct 62371 GTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAA 62430 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | |||| ||| || || || || || ||||| || | Sbjct 62431 TCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCC 62490 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || ||||| || ||||| | ||||| Sbjct 62491 CTGTTAGAGTTTTGACGAAAATTTGCAT 62518 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || |||||||||||||| || | || ||||| || ||||||| Sbjct 63395 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTA 63453 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| ||||| | |||||| || || | | ||| |||||||| || || | Sbjct 63454 GCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGA 63513 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || || | || | |||| || || || || | ||| || ||||| | Sbjct 63514 TTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTAC 63573 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| || |||| |||||| Sbjct 63574 CGGTCAAAGTCTTAACAAAGATCTGCAT 63601 Score = 105 bits (116), Expect = 2e-17 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || || || || |||||||| | || ||||| || || ||||||||||| | | ||| Sbjct 63609 CTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTT 63668 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || |||||||| || ||||| ||||| | || || || || | | ||| ||| Sbjct 63669 CTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCT 63728 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| ||||||||||| || || | || | | | || ||| || ||||| | Sbjct 63729 TCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAAT 63788 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || | |||||| ||||| | |||||| Sbjct 63789 GTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 63829 Score = 104 bits (114), Expect = 5e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||| || |||||||| ||||| ||||| || ||||| || | | ||||| |||||||| Sbjct 61358 GACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 61417 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||| || ||||| || || | || |||||||| | | || |||||||| ||||| Sbjct 61418 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 61477 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 ||||||| || || | || | |||| ||| || || || || || ||||| || Sbjct 61478 AATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTT 61537 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || | ||||| Sbjct 61538 ACCTGTCAGTGTCTTGACAAAAATTTGCAT 61567 Score = 104 bits (114), Expect = 5e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 |||||| |||||||| ||||| ||||| || ||||| || | | ||||| |||||||| Sbjct 61725 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 61784 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||| || ||||| || || | || |||||||| | | || |||||||| ||||| Sbjct 61785 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 61844 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 |||||| || || | || | |||| ||| || || || || || ||||| || Sbjct 61845 AATTTTCGACTTAACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTT 61904 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || | ||||| Sbjct 61905 ACCTGTCAGTGTCTTGACAAAAATTTGCAT 61934 Score = 93.3 bits (102), Expect = 1e-13 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 |||||| |||||||| ||||| ||||| || ||||| || | | ||||| |||||||| Sbjct 60982 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 61041 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||| || ||||| || || | || |||||||| | | || |||||||| ||||| Sbjct 61042 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 61101 Query 152015 AATTTT 152020 |||||| Sbjct 61102 AATTTT 61107 Score = 93.3 bits (102), Expect = 1e-13 Identities = 101/133 (76%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || |||||||||||||| || | || ||||| |||||||||| Sbjct 61956 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTA 62014 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || || || | ||||| || |||| | ||| ||||| || ||||||| Sbjct 62015 GTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAA 62074 Query 152017 TTTTTTGTTTGAC 152029 | || |||||| Sbjct 62075 TCTTACTTTTGAC 62087 Score = 89.7 bits (98), Expect = 1e-12 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 ||||||||||| || ||||| ||||| | | ||||| || ||||| || || ||| Sbjct 62983 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 63042 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || || || | || || || || | | || |||||||| ||||||||||| |||| Sbjct 63043 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTG 63102 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || | || | |||| ||| || || || || || ||||| || || || ||||| Sbjct 63103 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 63162 Query 152088 TTCACGAAGACCTGCAT 152104 || ||||| | ||||| Sbjct 63163 TTGACGAAAATTTGCAT 63179 >seq318 Length=372 Score = 104 bits (114), Expect = 5e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 |||||| |||||||| ||||| ||||| || ||||| || | | ||||| |||||||| Sbjct 90 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 149 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||| || ||||| || || | || |||||||| | | || |||||||| ||||| Sbjct 150 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 209 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 |||||| || || | || | |||| ||| || || || || || ||||| || Sbjct 210 AATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTT 269 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || | ||||| Sbjct 270 ACCTGTCAGTGTCTTGACAAAAATTTGCAT 299 >seq226 Length=457 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || |||||||||||||| || | || ||||| |||||||||| Sbjct 301 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTA 243 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || || || | ||||| || || | | ||| |||||||| || || | Sbjct 242 GTTGCTTACCAGCAAAAATCAATCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGA 183 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || || | || | |||| || || || || | ||| || ||||| | Sbjct 182 TTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTAC 123 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| || |||| |||||| Sbjct 122 CGGTCAAAGTCTTAACAAAGATCTGCAT 95 >seq11 Length=651801 Score = 100 bits (110), Expect = 7e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||| | ||| | ||| || || |||||||||||||| || | || |||||| || Sbjct 624500 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 624559 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||||| | || || || ||||| | || || ||||| | | ||| |||||||| Sbjct 624560 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 624619 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| || || |||||| | || | | |||| ||| || ||||| | ||| || Sbjct 624620 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 624679 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 || || || || | |||||| |||||| Sbjct 624680 GGTCTTACCAGTCAAAGTCTTAACGAAG 624707 >seq331 Length=346 Score = 93.3 bits (102), Expect = 1e-13 Identities = 101/133 (76%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || |||||||||||||| || | || ||||| |||||||||| Sbjct 188 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTA 246 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || || || | ||||| || |||| | ||| ||||| || ||||||| Sbjct 247 GTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAA 306 Query 152017 TTTTTTGTTTGAC 152029 | || |||||| Sbjct 307 TCTTACTTTTGAC 319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153814443168530