Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740225.1_202016-09-
21] 599 sequences; 12,571,992 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq12 154 2e-32
seq9 114 2e-20
seq15 109 8e-19
>seq12
Length=1063839
Score = 154 bits (170), Expect = 2e-32
Identities = 177/238 (74%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | |||||||| ||||| || |||||||| ||||| ||||| | |
Sbjct 64697 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 64638
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| || | || |||||||||||| || |||||||| || || ||||||
Sbjct 64637 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 64578
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | |||||||| || || ||| | || || || |||| | ||||||||
Sbjct 64577 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 64518
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
||||| ||||| || || ||||||||||| || | || |||||||||| ||| ||
Sbjct 64517 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTATGCAAATTT 64460
Score = 132 bits (146), Expect = 7e-26
Identities = 172/238 (72%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || |||||||| || |||||||| ||||| ||||| |
Sbjct 64469 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 64410
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| || | ||| ||||||||||||||||||||||| || || ||||||
Sbjct 64409 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 64350
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || | |||||||| || || ||| |||| ||| || |||| || || || ||
Sbjct 64349 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 64290
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|| ||||| ||||| ||| | || |||| || | | |||||||||| ||| ||
Sbjct 64289 ATCCAAAAGGAATCTACTCTTCACCTGGTGTTGAGACTGAGAGGTGGTATGCAAATTT 64232
Score = 123 bits (136), Expect = 4e-23
Identities = 167/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | |||||||| ||||| || |||||||| ||||| ||||| | |
Sbjct 64241 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 64182
Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| || |||| || ||||||||||| || |||||||| || || || ||
Sbjct 64181 GACACTATTGACAACGTTAAGTCA-AAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 64123
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||||| | |||||||| || |||||| |||| ||| || |||| | || || ||
Sbjct 64122 GCAAAGATTGATTTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 64063
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767
||||||||| || || ||| | || | || || | || | |||||||
Sbjct 64062 TATTCAAAAGGAGTCCACTCTTCACCTCGTCTTGAGGTTGAGGGGTGGTA 64013
Score = 91.5 bits (100), Expect = 2e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | ||||| | || || ||||| ||||| | || ||||| |
Sbjct 65153 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 65094
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || || | || |||||||||||| || |||||||| || || ||||||
Sbjct 65093 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 65034
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | || ||||| || || || |||| || || |||| | ||||| ||
Sbjct 65033 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 64974
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| || || || || || ||| | || || | || ||||||||||
Sbjct 64973 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTAT 64924
>seq9
Length=435907
Score = 114 bits (126), Expect = 2e-20
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 124548 TTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATT 124607
||| | ||||| | || || || || || ||| | || ||||| | ||| || |||
Sbjct 74436 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 74495
Query 124608 TCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTT 124667
||| | || || |||||||| || |||||||| |||||||| |||||||| |
Sbjct 74496 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 74555
Query 124668 ATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAA 124727
|| ||||| || || ||||| || || || |||| || || || || |||||||||
Sbjct 74556 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 74615
Query 124728 GAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| |||||||| || || || | || ||||||||||
Sbjct 74616 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTAT 74656
>seq15
Length=1066225
Score = 109 bits (120), Expect = 8e-19
Identities = 358/556 (64%), Gaps = 28/556 (5%)
Strand=Plus/Plus
Query 205318 CtttttatttttaattttGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAATCCA 205377
||||| || |||| ||| || ||||| |||| | | | ||||| ||| || ||
Sbjct 457372 CTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGAGATTTGTTCTTTCAAGGCA 457431
Query 205378 TTAATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTTT 205437
| ||| || | ||| | |||||||| || | | ||||||| || ||| ||| |
Sbjct 457432 TCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACTCACCTGGCTCC 457491
Query 205438 AAATTAGTTAAATGT-GCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGG 205496
| | | || | | |||||||| |||||| ||| ||| |||| ||||| ||
Sbjct 457492 ATGTC-GACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAATGTTAAACGG 457550
Query 205497 TACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAG------------ 205544
||| || || ||||||||| || | ||| |||| | |||| |||
Sbjct 457551 TACTCCCAACCCCATATCACAAGAACGTTGGTACAATAAGCATGAAAGGCGGGGCTTACC 457610
Query 205545 --ATATTTATTATTAATT----------ACATGAAATTGTACAAAACAATGACAAGGTGG 205592
|| || | || || |||| || ||| |||| ||| || |||||
Sbjct 457611 GGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAAATATGGCATGGTGG 457670
Query 205593 TATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTC 205652
| | |||| || |||| ||| || |||||||| | | || || ||||| |
Sbjct 457671 CAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATGATTCTTCTATCGTA 457730
Query 205653 AGGtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATA 205712
|| || | || | ||||| |||| ||| | |||||||||| ||||| |||||
Sbjct 457731 GGGATTTGTCTTAAGTTTATGAATAACCTGTTTCAATTGATCAATACCTTGTCCAGTATA 457790
Query 205713 ATTTGTATC-CATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTG 205771
| ||| || || | ||||||||||||||||| | ||||||||| |||||||| |
Sbjct 457791 GTCGTCATCGCACGTCT-TGTATTTAGCACCAAAATGCCTCCATTGAAATCCATAAACGG 457849
Query 205772 GACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttATATATTTTAATGATC 205831
| || | ||| ||| |||| ||||| || || || || | || ||||| ||||
Sbjct 457850 GCCCCAGATCTCCTACTTTCCTATCTTTGAACCCCATCTTATCTAAATATTCACGAGATC 457909
Query 205832 CATTTTCATCCCAAAT 205847
|||| | ||||||||
Sbjct 457910 CATTACCGTCCCAAAT 457925
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755450343523200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |