Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740225.1_202016-09- 21] 599 sequences; 12,571,992 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq12 199 9e-46 seq9 158 3e-33 seq11 150 4e-31 >seq12 Length=1063839 Score = 199 bits (220), Expect = 9e-46 Identities = 173/215 (80%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985 ||||| || ||||||||||||||||| |||||||||||||| || | || ||||| ||| Sbjct 64027 CTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 64086 Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 ||||| || || ||||| || || || | || ||| |||||||||||||| ||||| ||| Sbjct 64087 TCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 64146 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105 |||||||||||| ||| ||||| ||||| ||||| ||| ||| || || ||||| | Sbjct 64147 TCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 64206 Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||||| || || ||||| | |||||| Sbjct 64207 GTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 64241 Score = 179 bits (198), Expect = 8e-40 Identities = 175/223 (78%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAG 194977 ||| |||||||| || ||||||||||| || || ||||| || ||||| || | |||| | Sbjct 64248 TCTCAGTCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAG-G 64306 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| || |||||||| || || || | || ||||| || ||||| || | Sbjct 64307 TTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATAC 64366 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 ||||||| ||||||||||| |||||||| ||||| ||||| ||| ||| || || | Sbjct 64367 CTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTA 64426 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| | ||||| ||||| | |||||| ||||| | |||||| Sbjct 64427 GGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 64469 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | || | || |||||||| ||||| || ||||| | || || Sbjct 64476 TCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGT 64535 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| || |||||||| || || || | || |||||| ||||||||||| || Sbjct 64536 TCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACC 64595 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||||||||| ||| ||||| ||||| ||||| ||| ||| || || || Sbjct 64596 TTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAG 64655 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | ||||| ||||||| || || || || | |||||| Sbjct 64656 GGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 64697 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || || | ||||| || | |||||||| || ||||| |||||||| | || || Sbjct 64932 TCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGT 64991 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| ||||||||||| || ||||| | || |||||| |||||||| || || Sbjct 64992 TCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACC 65051 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||||||||| ||| ||||| || ||||| || ||| ||| ||||| | Sbjct 65052 TTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAA 65111 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || |||||||| || ||||| | ||||| Sbjct 65112 TGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 65153 Score = 134 bits (148), Expect = 3e-26 Identities = 165/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | |||||| || | ||||||||| || || ||||| || ||||| || | |||| | Sbjct 64704 TCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAG-G 64762 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| || ||||| ||||||||||| || ||||| | | ||||| |||||||| || | Sbjct 64763 TTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATAC 64822 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| ||||| || ||||| ||| ||||| || || ||||| || ||| || || | Sbjct 64823 CTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTA 64882 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || |||||||| || || || | ||||| Sbjct 64883 AAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 64925 >seq9 Length=435907 Score = 158 bits (174), Expect = 3e-33 Identities = 165/214 (77%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | |||||| || | ||| | |||||| ||||||||||| ||||| || | |||| | Sbjct 74648 TCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-G 74590 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| || ||||| | |||||||| || ||||| | || ||||||||| || || || | Sbjct 74589 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATAC 74530 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| ||||||||||| ||| |||||| || ||||| ||||| ||| ||| ||||| | Sbjct 74529 CTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 74470 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | ||||| || |||||||| || || || Sbjct 74469 AAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 74436 >seq11 Length=665089 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | || | |||||| || ||||| || ||||| || | ||||| Sbjct 637802 TCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGT 637861 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | |||||||| || ||||| | || ||||||||| || || || || Sbjct 637862 TCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACC 637921 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| || || |||||| || ||||||||||| ||| ||| ||||| | Sbjct 637922 TTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAA 637981 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | ||||| || |||||||| || ||||| Sbjct 637982 AGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 638014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109473085075433