Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740225.1_202016-09- 21] 599 sequences; 12,571,992 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq12 131 1e-25 seq9 93.3 3e-14 >seq12 Length=1063839 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||||||| ||||||| || || || ||| | || || || | Sbjct 64469 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 64410 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | | || ||| || ||| ||||||||||| | || |||||| Sbjct 64409 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 64350 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 |||||| | |||| ||| ||||| || || || || | | ||| || | ||||||||| Sbjct 64349 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 64290 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || |||||||| ||||| | ||| ||||||||||| || |||| || Sbjct 64289 ATCCAAAAGGAATCTACTCTTCACCTGGTGTTGAGACTGAGAGGTGG 64243 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||||||||| || | ||||| || || || ||| | || || || Sbjct 64697 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 64638 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | | || || || ||| || || ||||| | || ||||| Sbjct 64637 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 64578 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| ||| ||||| || ||||| |||| | ||| || | || || ||| Sbjct 64577 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 64518 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| || |||||||||||||| |||||||||||||| |||| || Sbjct 64517 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 64471 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||||||||| ||||| |||||||| || || || |||||| | ||| || || Sbjct 498220 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 498279 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 || ||| | | | | || || ||||| || || ||||| | || || Sbjct 498280 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 498339 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || ||| | || | ||| ||||| || |||| || | | ||| || | |||||| Sbjct 498340 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 498399 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| |||||||| ||||| | ||| |||| ||||||||| |||| || Sbjct 498400 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 498449 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||| || | ||||| || || || ||| | || || || Sbjct 64241 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 64182 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | | || || ||| ||| || || ||||| | || || ||| Sbjct 64181 GACACTATTGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 64122 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| ||| |||||||| || || || | | ||| || |||||||||| Sbjct 64121 CAAAGATTGATTTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 64062 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAA 107785 |||||||||||||| || | ||| | || ||||| ||| | || || || Sbjct 64061 ATTCAAAAGGAGTCCACTCTTCACCTCGTCTTGAGGTTGAGGGGTGGTAA 64012 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729 ||||| ||||| | || | ||| ||||| ||||| || |||| | ||| || | ||| Sbjct 64811 GATCAACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGAC 64752 Query 107730 TACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||| |||||||| ||||| | ||| |||||||||||||| |||| || Sbjct 64751 TACAACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 64699 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| ||||| ||||| || || |||||||| || | ||| || || | Sbjct 65153 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 65094 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | | || || || ||| || || ||||| | || ||||| Sbjct 65093 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 65034 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | || | ||| ||||| ||||| || |||| | ||| || | || |||||| Sbjct 65033 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 64974 Query 107736 ATTCAAAAGGAGTCTACGTTGCA 107758 ||||| |||||||| || || || Sbjct 64973 ATTCAGAAGGAGTCCACCTTACA 64951 >seq9 Length=435907 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 107564 TTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGT 107623 ||||||||| ||||| || || || ||||| || | ||| || || || ||| | Sbjct 74435 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 74494 Query 107624 CGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACT 107683 | | | || || ||||||| || || ||||| | || || || || ||| | Sbjct 74495 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 74554 Query 107684 TATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAA 107743 || | ||| ||||| || |||| |||| | ||| || | ||||||||||||||||| Sbjct 74555 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 74614 Query 107744 GGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || || |||||| | || ||||||||| |||| || Sbjct 74615 AGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 74653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398873888074711