Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740295.1_202016-09- 21] 370 sequences; 12,144,653 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq12 127 2e-24 seq9 100 2e-16 >seq12 Length=1046152 Score = 127 bits (140), Expect = 2e-24 Identities = 163/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 23993 GCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGA 24052 |||| | || |||| || |||| || || | || ||| | || || || | ||| Sbjct 63850 GCAAATTTTCGTAAGAAATATAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGA 63791 Query 24053 CACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACA 24112 ||| || || | |||||| |||||| || |||||||| || ||||| |||||||| Sbjct 63790 CACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAACA 63731 Query 24113 GAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACAT 24172 |||| |||||| | || |||||||| ||||||| |||| | | || || ||||| Sbjct 63730 GAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAACAT 63671 Query 24173 TCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| |||||||| |||| || ||||| ||||||||||| || Sbjct 63670 CCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 63626 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || || || ||| | || || | || || || || | Sbjct 64090 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 64031 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || || || ||||| ||||| || ||||| |||||| Sbjct 64030 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 63971 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | | ||| ||||| || ||||| | |||| | | || || ||| Sbjct 63970 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 63911 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| |||||||| |||| || ||||| ||||||||||| || Sbjct 63910 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 63864 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| |||||| | || || || || ||||| || || | |||||| | ||||| || | Sbjct 493301 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATC 493360 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 ||||| || || | ||||| ||||| ||||| ||||| || || || || Sbjct 493361 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 493420 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||||| ||| |||| | | || |||||| | ||||||| |||| | ||| || Sbjct 493421 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 493480 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| |||||||| | || || || || ||||||||||| || Sbjct 493481 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 493531 >seq9 Length=438627 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 ||||| || || || ||||| || | || || | ||||| || | ||||| || Sbjct 72535 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 72594 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | ||||| ||||||| ||||| ||||| || || || || ||||| ||| || Sbjct 72595 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 72654 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | | || |||||| | ||||| | |||| | | || || |||||||||||| Sbjct 72655 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 72714 Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || | || ||||| || ||||||||||| || Sbjct 72715 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 72752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429934061257350