Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740295.1_202016-09- 21] 370 sequences; 12,144,653 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2 138 9e-28 seq15 96.9 3e-15 >seq2 Length=803042 Score = 138 bits (152), Expect = 9e-28 Identities = 447/686 (65%), Gaps = 26/686 (4%) Strand=Plus/Minus Query 19246 GGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGT--GTCGCGTGTTT 19303 || || ||| |||||||||| || |||| || | ||||| |||| |||| | ||| Sbjct 386657 GGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGAGCGTTTGCAAGTCGAATCTTT 386598 Query 19304 TTTC-TGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTT-- 19360 || | ||| | || || || |||| | |||||| || |||||| | Sbjct 386597 CCTCCTTCAGTT---ATAGAAAAACTGGGTATTTCTCATGTTAAAGG---TTTGCTATTG 386544 Query 19361 -ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA-- 19417 | || || || ||| ||| || || |||||||| ||| | || ||| | | || | Sbjct 386543 TACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATTGGTACAATGCTGAAT 386484 Query 19418 -CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAA 19476 | ||| | || |||||| || |||||||| ||||| || | || || || ||| Sbjct 386483 GCTAAAGAGCC---CAAAATCGTCAATGGTCCAGAAATTTTGAGCAAGTACGTTGGTTCT 386427 Query 19477 TCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGG 19536 || |||||||| | || ||| ||| || || |||| |||| | | | | |||| Sbjct 386426 TCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAGAATATAGG-GCTAAGGG 386368 Query 19537 CGCAAAAG-TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAG 19595 | || ||| || || ||||| || | ||||| |||| | | | ||||| || Sbjct 386367 TGAGGAATCTTCCTTACATATTATTATTTTCGATGAGCTGGATTCTGTTTTCAAGCAGAG 386308 Query 19596 AGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAA 19649 |||||| || || | ||| ||| |||| ||| || |||||| | | | || Sbjct 386307 AGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAGTTAATCAATTGTTAGCTAA 386248 Query 19650 ATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709 | | || |||||| | || ||||||||||||| |||||||| ||||| ||| | || Sbjct 386247 AATGGATGGTGTTGATCAGTTGAATAATATTTTGGTTATTGGTATGACCAATCGTAAAGA 386188 Query 19710 ATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTT 19769 ||||||||||| || | || || || ||| | || ||| | | | |||||| | || Sbjct 386187 TTTAATAGACAGTGCTCTTTTGCGTCCAGGTAGATTTGAAGTCCAAGTTGAAATTCATTT 386128 Query 19770 ACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAA 19829 |||||||||| ||| | | ||||||| |||| || || | ||| | |||| Sbjct 386127 ACCCGATGAAAAAGGAAGACTCCAAATTTTCGACATTCAGACGAAGAAAATGAGGGAAAA 386068 Query 19830 TAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTATAG 19889 ||| | | | |||||||| | ||| || | || || || ||||||| Sbjct 386067 TAATATGATGAGCGACGATGTTAACTTAGCTGAGTTAGCTGCATTAACAAAAAACTTCTC 386008 Query 19890 CGGCGCAGAACTTGAGGGATTAGTGA 19915 || || || ||||||| ||||||| Sbjct 386007 TGGTGCTGAGATTGAGGGTTTAGTGA 385982 >seq15 Length=1062108 Score = 96.9 bits (106), Expect = 3e-15 Identities = 172/251 (69%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 41103 CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATA 41162 || ||||| |||||| ||| | || |||| ||||| | || || || |||||||| Sbjct 454304 CTTTCATGCTTATTGTACCAACGTTCTTGTGATATGGGGTTGGGAGTACCATTTAACATT 454245 Query 41163 GCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAA 41222 || |||||| || | || |||||||| | ||| | | | | || ||||| Sbjct 454244 GCATCATATGCTTTGTTGACTAGAATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAG 454185 Query 41223 TTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAGAA 41282 || |||| || || || |||| |||| |||| | | ||||| || | || | |||| Sbjct 454184 TTCATTCATACTTTGGGGGATGCACATGTTTATAAAGACCACATTGATGCCTTGAAAGAA 454125 Query 41283 CAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAAACGCGCTGTTGAAAAC 41342 ||| | || |||| || |||||||| || | ||| |||||| | | ||| || || Sbjct 454124 CAAATCACCAGAAATCCAAGACCATTCCCGAAACTAAAGATTAAAAGGGACGTTAAAGAC 454065 Query 41343 ATTGATGATTT 41353 ||||||||||| Sbjct 454064 ATTGATGATTT 454054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454207721850