Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740425.1_202016-09-
21] 489 sequences; 12,256,569 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq9 104 2e-17
seq12 98.7 8e-16
seq11 96.9 3e-15
>seq9
Length=444539
Score = 104 bits (114), Expect = 2e-17
Identities = 156/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | | |||||| ||||| || | || |||||||||||||||||||| ||
Sbjct 77125 ATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA 77066
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || | | ||||| | ||| |||||||| |||| | | |||||||| ||
Sbjct 77065 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 77006
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| ||||| ||||||| || | | |||| ||||| | |||||
Sbjct 77005 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 76946
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374
|| |||| || | || || || |||| ||| || ||||||
Sbjct 76945 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 76904
>seq12
Length=1060204
Score = 98.7 bits (108), Expect = 8e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | ||| || | || | ||||| || || || || ||||||||||||||
Sbjct 63576 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 63635
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || | | ||||| || || ||||| || |||| | | ||||| || |||
Sbjct 63636 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 63695
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331
|| || ||||| ||||| ||| ||| | ||| | | || | ||| |||| |||||
Sbjct 63696 GGGATACCTTCCTTGTCTTGAAT-TTTCGACTTAACGTTGTCGATGGTATCGGAAGATTC 63754
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||||| ||||||| ||| || || |||||||||||
Sbjct 63755 AACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 63805
>seq11
Length=659545
Score = 96.9 bits (106), Expect = 3e-15
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | || |||||| || ||||||| || ||||||||||| |||||||| ||
Sbjct 632237 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCTTTTTGGATGTTGTAGTCA 632296
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| | | ||||| | ||| |||||||| |||| | | |||||||| ||
Sbjct 632297 GATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 632356
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| ||||| ||||| || | | |||| |||||| | |||||
Sbjct 632357 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCA 632416
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373
|| |||| || | || || || |||| ||| || || ||
Sbjct 632417 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 632457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420131896130268
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |