Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740425.1_202016-09-
21] 489 sequences; 12,256,569 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq12 178 1e-39
seq5 129 7e-25
seq9 125 8e-24
seq11 114 1e-20
>seq12
Length=1060204
Score = 178 bits (196), Expect = 1e-39
Identities = 167/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||||||||| || || || |||||||| || || |||||||| || |
Sbjct 63349 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 63290
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || | ||| | |||||||| |||||||| || |||||||||||||||
Sbjct 63289 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 63230
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | |||||||| ||||||||||| || |||| | | || || | ||||| |||
Sbjct 63229 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 63170
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| |||||||| ||||||||||| || ||||||
Sbjct 63169 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTG 63137
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| | ||||| ||||||||||| || || ||||| || |
Sbjct 493860 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCT 493919
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| | || || || |||||||| || ||||| || |||||
Sbjct 493920 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 493979
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||||||| | || |||| | | || | | ||||| ||
Sbjct 493980 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 494039
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||| ||||| || | ||||||
Sbjct 494040 ATCCAAAAGGAATCTACTCTACACTTGGTCTTG 494072
Score = 123 bits (136), Expect = 3e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| | ||||| || || || ||| | |||||||| ||
Sbjct 63577 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 63518
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | ||||| ||||||||||| || || |||||||| ||
Sbjct 63517 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 63458
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || ||||| |||||||| || || || | | | ||| | | ||||| ||
Sbjct 63457 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 63398
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
||||||||||||| ||||||||
Sbjct 63397 ATCCAAAAGGAATCTACTCTTCA 63375
>seq5
Length=571735
Score = 129 bits (142), Expect = 7e-25
Identities = 320/476 (67%), Gaps = 21/476 (4%)
Strand=Plus/Minus
Query 81223 TCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCG 81281
|| ||| |||||||||| ||||| ||||| || || | ||||| || | ||| ||
Sbjct 301514 TCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCA-CG 301456
Query 81282 CGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCA 81341
||||| | ||| ||||| | | || | ||| || | || || ||||||||
Sbjct 301455 AATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCA 301396
Query 81342 TGGCTCCAGATACACGGCGATCGACCC----CTTGCGACGGCCACCCTGGTTGACGTAAC 81397
||| ||||| || | ||| | || || ||| | |||||||||| || ||||
Sbjct 301395 TGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTT-ATTACCACCCTGGTCAACATAAC 301337
Query 81398 GGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTAC 81457
||||||| || || ||||| | |||||| || | ||| | || |||||| ||||
Sbjct 301336 GGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTAC 301277
Query 81458 CCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACC 81517
| | || || || | | || | || ||| ||||| || ||||| | |
Sbjct 301276 CAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAG--C 301219
Query 81518 ACTTT--GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTT 81575
| ||| |||||| |||||| |||| ||| || ||||| |||||||| || |
Sbjct 301218 AGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTC 301159
Query 81576 TTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAAC 81633
|||||| ||| ||||||||| ||||| ||||| |||| ||| ||||||||||||
Sbjct 301158 CTTCATGGCAACCAAGAAACAAGAGGACATTTGAGG--TTTTGGAGTACCGGCATTGAAC 301101
Query 81634 AGTGTTGGGGTCGCGTGAATGAAATAACGGTTT---GACATCAGGTCATAGGTTTC 81686
| ||||| | |||||| | ||||| ||| ||||||| || ||| |||||
Sbjct 301100 AACGTTGGAGAGGCGTGAGTAAAATA---TTTTAGAGACATCAAGTTATACGTTTC 301048
>seq9
Length=444539
Score = 125 bits (138), Expect = 8e-24
Identities = 338/512 (66%), Gaps = 15/512 (3%)
Strand=Plus/Plus
Query 81232 TTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTC 81290
||||||||| ||||||||||| || || | ||||| || | ||| || || ||
Sbjct 244571 TTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCA-CGAATTTCTTC 244629
Query 81291 ATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAG 81350
| ||| || | | | |||| |||||| | ||| || ||||||||||||||||
Sbjct 244630 CTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCTGCATGCCATGGCTCCAA 244689
Query 81351 ATACACGGCGATCGACCC------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGT 81404
| | ||||| | || |||| || ||||||||| || |||||||||||
Sbjct 244690 GAAAAGGGCGAAAGCACCAGGTCTCTTGTTAC---CACCCTGGTCCACATAACGGGCAGT 244746
Query 81405 CGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGAT 81464
|| || ||||| | |||||| || | || | ||| |||||| ||||| ||||
Sbjct 244747 ATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTACCAGCGAT 244806
Query 81465 ACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTT-- 81522
| || || ||| || | ||| |||| |||||| | ||||||| || |||
Sbjct 244807 ATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTG--CAGTTTTG 244864
Query 81523 GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATG 81582
|||||| |||||| |||| || |||||||| || ||||| || | ||||||
Sbjct 244865 GAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCATCCTTCATG 244924
Query 81583 TCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGG 81642
||| |||||||| ||||| ||||| | | || || ||||| | ||||||
Sbjct 244925 GCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGAATAAAGTTGGG 244984
Query 81643 GTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATA 81702
| |||||| |||| || | ||||||| | ||| || | | || | |||
Sbjct 244985 GAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCACAGATTCGATA 245044
Query 81703 TCGTCACCGTGAATACCGATAGCTACACGCAT 81734
||| ||| || ||||| | || ||||||||
Sbjct 245045 TCGCTACCATGGATACCTAGCGCCACACGCAT 245076
Score = 111 bits (122), Expect = 2e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
||||||||||| | || || ||||| || ||| | || ||||| || ||| | |||
Sbjct 76905 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 76964
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || ||||| |||||||| || || || || ||||| || | |
Sbjct 76965 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 77024
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||||||||||||| | || || | | | ||| | | ||||| || | |||||
Sbjct 77025 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 77084
Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618
||||||||| | || ||||||||
Sbjct 77085 GAATCCACTTTGCACTTAGTCTTG 77108
>seq11
Length=659545
Score = 114 bits (126), Expect = 1e-20
Identities = 159/223 (71%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 27396 TATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGT 27455
|||| | || || | | ||| || ||||| | || || ||||| || ||| | || ||
Sbjct 632476 TATTCCAATTTTGTACAGCTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGT 632417
Query 27456 TGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCC 27515
||| || ||| | ||||| ||| | ||| | || || || |||||||| || || ||
Sbjct 632416 TGAATCTTCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCC 632357
Query 27516 TCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGC 27575
|| ||||| || | | || ||||||||||||||| | || || | | | || ||| |
Sbjct 632356 ACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATC 632297
Query 27576 AGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||| || ||||||| ||||||||| | ||| | ||||||
Sbjct 632296 TGACTACAACATCCAAAAAGAATCCACTTTACATTTGGTCTTG 632254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570306913977680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |