Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740445.1_202016-09-
21] 517 sequences; 12,286,898 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq9 199 1e-45
seq5 199 1e-45
seq15 134 4e-26
>seq9
Length=441105
Score = 199 bits (220), Expect = 1e-45
Identities = 1069/1681 (64%), Gaps = 49/1681 (3%)
Strand=Plus/Minus
Query 363364 TATGAGAAGGATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTA 363423
|| || | |||| || ||||| |||||||| ||||| ||||| || ||| |
Sbjct 242853 TACGATAGGGATTTCCAGTATACGTATTTCGGATTCAAGACACTGGAGCGTTCGTACTTG 242794
Query 363424 TCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATT 363483
| | || ||||| | | ||||| || |||||| || |||||||||| || |
Sbjct 242793 CTAAGACTGAACGGTGAAGTGGCAGAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTA 242734
Query 363484 GGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT 363543
||||||||| | ||| | || | | | | | || ||||| || | || |
Sbjct 242733 GGTATCCATGGTAGCGATATCGAATCTGTGCTGAAGACTTATAA--TTTGATGTCGTTAA 242676
Query 363544 G-TA-TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGT 363601
| || ||||| ||||| | ||||| | | ||| ||||| || | |||| || ||||
Sbjct 242675 GATACTTCACTCACGCTTCCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGT 242616
Query 363602 CTTCTTGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTT 363660
|||| || |||||| | |||||||| || || ||||| ||||| | ||| || |
Sbjct 242615 CTTCATG-TTTCTTAATTGCCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTG 242557
Query 363661 AAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTT 363720
|| | |||||| | |||||||| | |||||| || ||||| | ||| |||| |
Sbjct 242556 AAAGAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATC 242497
Query 363721 CGTGC-ACAGAACAGTTACATTCGC-GGCACAGGGGGATACT-CGAATGGGCTGGTTCCC 363777
||| | |||| ||| || ||| || || || |||| | || ||| || ||||
Sbjct 242496 CGTTCCACAGGTTC-TTATAT-CGCTGGTACCAACGG-TACTTCAAACGGGTTGATTCCT 242440
Query 363778 ATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAA 363837
||| ||||||| || | |||||||| | || || ||||||||||| ||| |
Sbjct 242439 ATGATTCGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCT 242380
Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897
|| || || || | | | ||||| ||||| ||||| || || ||| | || ||
Sbjct 242379 GGTGCTTTCGCCCTTTTCTTGGAGCCATGGCATGCAGATATCTTCGACTTTGTCGATATC 242320
Query 363898 CGGAAAAACACG-GGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGT 363956
| |||||||| || || || ||| | |||||| | ||| ||||| ||| || ||| |
Sbjct 242319 AG-AAAAACACATGGTAAGGAAGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGAT 242261
Query 363957 TTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACA 364016
|||| | ||| ||||| || || | | | | | |||| | | |||| || ||
Sbjct 242260 CCCTGATCTTTTCATGAAACGTGTTCAAGAGGATGGGCCTTGGACTTTGTTTTCGCC-CA 242202
Query 364017 CGAATGTCC-AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGT 364075
|| || |||| | ||||| |||||||| || | || | ||||| |
Sbjct 242201 GTGCTGCCCCAGGTTTAGATGATGTGTGGGGTGATGAATTTGAAGAACTATATACTCGTT 242142
Query 364076 ATGAATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATC 364134
| ||| || ||| | | | |||| |||||| || || ||| | |||| ||||||
Sbjct 242141 ACGAA----AGAGAAGGTCGTGGTAAAACAATTAAAGCCCAAAAGTTGTGGTATGCCATT 242086
Query 364135 ATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGC 364194
|| | | |||| || ||||| ||||| | ||| | || || || | || ||| |
Sbjct 242085 TTGCAAGCACAGACAGAAACAGGTACACCTTTCATGGTTTATAAGGACGCATGTAACAGG 242026
Query 364195 AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTAT 364253
||| | ||||| ||| || | ||||| || || | | || ||||| || || |
Sbjct 242025 AAGACAAACCAACAGAACTTAGGTACTAT-CAAATCATCTAATTTATGTTGTGAAATCGT 241967
Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313
||||| || | || || || ||||| || ||||| | || || || || || || ||
Sbjct 241966 CGAATATTCCTCCCCGGATGAAACTGCAGTTTGTAATTTAGCTTCTATTGCCCTACCAGC 241907
Query 364314 GTTTGT---------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAAC--- 364361
|| || | ||||||||| || | | || | | || | ||
Sbjct 241906 ATTCGTTGAGGTTTCAGAAGATGGTAAAACTGCAAGCTATAATTTCGA-GAGATTACACG 241848
Query 364362 ------CTA---TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCC 364412
||| |||| |||| ||| | ||| ||||||||| ||||| |||||
Sbjct 241847 AGATTGCTAAAGTCAT--TACTCACAACTTGAACAGAGTTATCGACCGTAATTACTATCC 241790
Query 364413 AATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGG 364472
| |||| || || ||| |||||| ||| | || |||| ||||||| | |||||
Sbjct 241789 AGTTCCCGAGGCTAGAAATTCAAATATGAAGCATAGACCTATTGCTCTTGGTATCCAGGG 241730
Query 364473 CCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCT 364532
| || || || ||||||| | | | ||||| ||| || |||| |||
Sbjct 241729 TTTGGCCGATACTTATATGATGTTGCGTCTACCCTTTGAATCGGAAGAAGCTCAAACTCT 241670
Query 364533 AAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGC 364592
||| || | ||||| ||||| || || ||| | | || || ||||| |||||
Sbjct 241669 AAACAAACAAATCTTCGAAACTATTTACCATGCTACTCTTGAAGCCTCCTGTGAATTGGC 241610
Query 364593 A-AAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCC 364651
|||| |||| ||| || ||||||| ||| || || || ||| |||| | || |
Sbjct 241609 CCAAAAAGAAGGTAAA-TATTCTACTTTTGAAGGTTCTCCAGCTTCTAAGGGTATTTTAC 241551
Query 364652 AGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCA 364711
| || ||| | ||||| | | |||| || | ||| ||||||| || || |
Sbjct 241550 AATTCGATATGTGGAACGCTAAACCATTTGGCATGTGGGACTGGGAAACCTTAAGAAAGG 241491
Query 364712 ACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTA 364771
|| || || ||||| | ||||| | || || || ||||| || || || |
Sbjct 241490 ACATTGTTAAACATGGGTTAAGAAACTCTTTGACTATGGCACCAATGCCAACCGCCTCAA 241431
Query 364772 CTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCAC 364831
|| | || || || || | || || ||||||||||| | || || | || || |
Sbjct 241430 CTTCCCAAATTCTTGGTTATAATGAATGCTTCGAACCAGTAACCTCAAACATGTACTCTC 241371
Query 364832 GCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCG 364891
| || || || || || ||||| | || |||||| || || | ||| | ||
Sbjct 241370 GTCGTGTCCTGTCTGGTGAATTCCAAGTTGTTAATCCATATTTACTACGTGATTTAGTCG 241311
Query 364892 ACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGC 364951
||| || | |||| ||| || ||||| | ||| | || | ||||||||| | |
Sbjct 241310 ACCTGGGTATTTGGGATGATAGTATGAAACAATATCTAATTACACAAAATGGTTCTATTC 241251
Query 364952 AGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTT 365011
| | | ||| | ||| |||| ||||| | ||||||||||| |||||||| |
Sbjct 241250 AAGGCTTACCAAATGTGCCACAAGAATTGAAGGAACTATACAAAACCGTCTGGGAAATCT 241191
Query 365012 C 365012
|
Sbjct 241190 C 241190
>seq5
Length=563368
Score = 199 bits (220), Expect = 1e-45
Identities = 696/1074 (65%), Gaps = 53/1074 (5%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || |||||| | ||||| ||| |||||| || |||| || || || ||||| |||
Sbjct 298134 TTTACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCT 298193
Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
|| |||||| | |||||||| || || |||||||| || | ||||| | ||| |
Sbjct 298194 TG-TTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGA 298252
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725
|||||| | |||||||| | ||| || || |||||| || ||||| || ||||| |
Sbjct 298253 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTC 298312
Query 363726 ACAGAACAG----TTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATG 363780
| || | ||||||| || ||| || |||| | || || | |||| |||
Sbjct 298313 A----ACTGGTTCTTACATTGCTGGTACAAACGG-TACTTCTAACGGTTTAATTCCTATG 298367
Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGG 363840
||||||| || | || ||||| | || || ||||||||||| ||| | ||
Sbjct 298368 ATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGGTAACAAGAGACCTGGT 298427
Query 363841 GCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGG 363900
|||||||| | || || || || ||||| ||||| ||||| ||| |||| | ||
Sbjct 298428 GCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTAGG 298487
Query 363901 AAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCT 363960
|| ||| || ||||||||| | |||||| | ||| ||||| ||| || ||| || ||
Sbjct 298488 AAGAACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCT 298547
Query 363961 GACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAA 364020
|| | ||| |||||||| || || | | | || ||| || | || | ||| |
Sbjct 298548 GATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCAACATCA 298607
Query 364021 TGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAA 364080
||| ||| | |||| | |||||||| | || |||||||| || ||
Sbjct 298608 GCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACGA- 298666
Query 364081 TCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139
|| ||| | | | ||||||| || || || || |||||| | |||| ||||
Sbjct 298667 ---GAAAGAAGGTCGTGGTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTGGA 298723
Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199
| || | ||| || || ||||| | | | ||||| ||| | || ||| | || ||
Sbjct 298724 AGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAATC 298783
Query 364200 CAACCAGCAGCACCTTGGT----ACAATTCAGCAGAGCAACCTATGTACCGAGATTATTG 364255
|| || | || | ||| ||| ||| || ||| |||| || ||| |||
Sbjct 298784 TAATCAAAAAAACTTAGGTGTCATCAAGTCATCA----AACTTATGCTGTGAAATTGTTG 298839
Query 364256 AATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGT 364315
||||| | ||||| || || ||||| || |||||| | || || | || | || || |
Sbjct 298840 AATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGCAT 298899
Query 364316 ---TTGTAA------AAGATGGT---ACTTTTGACCAC---CAGCATC-------TTTAT 364353
||| || | |||||| |||| |||| || | || | ||
Sbjct 298900 TCATTGAAACTTCTGAGGATGGTAAGACTT----CCACATACAACTTCAAAAAATTACAT 298955
Query 364354 GACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCA 364413
|| | | | || |||| | ||| | ||| || || || ||||| || ||
Sbjct 298956 GAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATTACTACCCT 299015
Query 364414 ATTCCTGAAGCCGAG-CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGG 364472
|| |||| |||| || |||||| | ||| | || |||| | | ||||| || ||
Sbjct 299016 GTTGAAGAAG-CGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTGTTCAAGG 299074
Query 364473 CCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCT 364532
||||||||| ||| ||| || | || |||||||||| || || ||| | ||
Sbjct 299075 TCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTGCT 299134
Query 364533 AAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGA 364586
||||| | ||||||||||| || ||| |||| | ||| ||||| |||||
Sbjct 299135 AAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTGA 299188
>seq15
Length=1067823
Score = 134 bits (148), Expect = 4e-26
Identities = 342/515 (66%), Gaps = 34/515 (7%)
Strand=Plus/Minus
Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-G 111477
||| || |||||||| || |||||||| ||||| | | ||||| || ||| || |
Sbjct 457563 TGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATA-AGATGGGGTTCAAAG 457505
Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537
| | ||| ||| ||||| || || ||||| |||||||||||| | || ||||||||
Sbjct 457504 ATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATTTCAATGGAGGCATTTTGGTGCTA 457445
Query 111538 ACTACAAAACCATGC-ACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTC 111596
| ||||| || ||| | ||| ||| | ||| || | ||||||||| | | ||
Sbjct 457444 AATACAAGACG-TGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAGGTT 457386
Query 111597 ATTGATCAAATTAAGAACAA-CCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCC 111655
||| || || |||||| || ||| || | | | || ||||||||||| ||||||||
Sbjct 457385 ATTCATAAACTTAAGACAAATCCCTACGA-TAGAAGAATCATTATGAGTGCCTGGAACCC 457327
Query 111656 AAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATG---- 111711
| || || || |||||||| | |||||||| ||| || | | ||||| ||||
Sbjct 457326 AGCTGATTTTGACAAAATGGCTTTGCCACCATGCCATATTTTTTCACAGTTCTATGTCAG 457267
Query 111712 --TACACGACG--------GGAT-------------GCTTTCATGCCAAATGTATCAGCG 111748
| | | | | |||| ||||||||| | |||| || ||
Sbjct 457266 TTTCCCCAAAGAAGGAGAAGGATCCGGTAAGCCCCGCCTTTCATGCTTATTGTACCAACG 457207
Query 111749 ATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTG 111808
||| |||||| || | || || |||||||| |||||| || || | | ||| |
Sbjct 457206 TTCTTGTGATATGGGGTTGGGAGTACCGTTTAACATTGCATCATATGCTTTGTTGACTAG 457147
Query 111809 CTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGC 111868
| || ||| | || | | | || ||||| |||||||| | | || |||||
Sbjct 457146 AATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAGTTCATTCATACTTTGGGGGATGC 457087
Query 111869 GCATGTTTACACAAACCACATTGATGCACTTAAAA 111903
|||||||| | | ||||||||||||| ||| |||
Sbjct 457086 ACATGTTTATAAAGACCACATTGATGC-CTTGAAA 457053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303344966504294
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