Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740445.1_202016-09- 21] 517 sequences; 12,286,898 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq12 98.7 9e-16 seq9 86.0 6e-12 >seq12 Length=1059096 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979 ||||| | | ||||| || ||||||||||| || || || | ||||| ||||| Sbjct 65883 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 65942 Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039 ||||||| | |||| | | |||||||||||||| || ||||| || || |||||| Sbjct 65943 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTT 66002 Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099 || | | || | ||||||| | || ||||| | || | |||||||| || Sbjct 66003 CGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGT 66062 Query 132100 CAGAGTTTTTATGAAAATCTGCATGACTTATTAG 132133 || ||| || | |||||||||||| | |||||| Sbjct 66063 CAAAGTCTTGACGAAAATCTGCATAATCTATTAG 66096 >seq9 Length=441105 Score = 86.0 bits (94), Expect = 6e-12 Identities = 282/436 (65%), Gaps = 2/436 (0%) Strand=Plus/Plus Query 146883 TAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA-TACACATTGC 146941 |||||| |||| || ||||| || || || | ||| ||||| | |||| |||| || Sbjct 241327 TAAATATGGATTAACAACTTGGAATTCACCAGACAGGACACGAC-GAGAGTACATGTTTG 241385 Query 146942 TAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCA 147001 || | || || || | ||||||| || | ||||||| || | ||||| |||| Sbjct 241386 AGGTTACTGGTTCGAAGCATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCA 241445 Query 147002 TGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTT 147061 | |||| ||| || |||| | || | | |||| | | || |||| Sbjct 241446 TTGGTGCCATAGTCAAAGAGTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAAGGTTT 241505 Query 147062 GCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGAC 147121 |||||||||||| | || | |||||||||| ||| | || | | || | Sbjct 241506 CCCAGTCCCACATGCCAAATGGTTTAGCGTTCCACATATCGAATTGTAAAATACCCTTAG 241565 Query 147122 TGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTG 147181 || ||| || | || |||| || | || || || |||||||||||| | Sbjct 241566 AAGCTGGAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGG 241625 Query 147182 CCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTT 147241 | || || | ||| ||| || |||||| ||||||||||||||| ||||||| Sbjct 241626 CTTCAAGAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTT 241685 Query 147242 CGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGC 147301 | || | || | ||||| | || | | | ||||||||||||||||||||| | Sbjct 241686 CCGATTCAAAGGGTAGACGCAACATCATATAAGTATCGGCCAAACCCTGGATACCAAGAG 241745 Query 147302 CGATAGGTCGATGCTT 147317 | ||||||| |||||| Sbjct 241746 CAATAGGTCTATGCTT 241761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608119900120