Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740455.1_202016-09- 21] 129 sequences; 11,993,383 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq12 179 7e-40 seq11 165 2e-35 seq9 161 2e-34 >seq12 Length=1020438 Score = 179 bits (198), Expect = 7e-40 Identities = 172/218 (79%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| |||| |||||||| || || ||||| ||||| || || || || || ||||||| Sbjct 62574 CAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTA 62633 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| ||||| || || | ||||||||| || || || || |||||||||||||||| Sbjct 62634 GCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAA 62693 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | || | ||| ||| |||||||| || | ||||| |||||||| || |||||||| | Sbjct 62694 TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTAC 62753 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCATTATGCTATTA 68471 | || | ||||||||||| |||||||| || |||||| Sbjct 62754 CGGTCAAAGTCTTGACGAAAATCTGCATAAT-CTATTA 62790 Score = 178 bits (196), Expect = 2e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||||||||| || || || ||||||||||| || ||||| | || || ||||| Sbjct 462722 CAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 462663 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| |||||||| ||||||||||| Sbjct 462662 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 462603 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | |||||| || || ||||| | ||||| ||||||| ||| || || Sbjct 462602 TTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGT 462543 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||||| || ||||| Sbjct 462542 CTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 462510 Score = 150 bits (166), Expect = 3e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| || | ||| |||||||| || ||||||||||| || || || || || || Sbjct 62113 CAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 62172 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| | ||||| ||||| || || | ||||||||| || || ||||| ||||||||||| Sbjct 62173 TTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 62232 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 |||||| || |||||| || || ||||| | ||||| || || | ||| || || Sbjct 62233 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 62292 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || || |||||||| || ||||| Sbjct 62293 CTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 62325 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || || || || ||||||||||| || || || | || || || || Sbjct 62341 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTC 62400 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| |||||| ||||| || || | || ||||| || || || || ||||||||||| Sbjct 62401 TTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTC 62460 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || || || | ||| ||| ||||| ||||| | ||||| || || || |||||||| Sbjct 62461 CTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGT 62520 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || | ||||| || || |||||||| Sbjct 62521 TTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 62553 >seq11 Length=645860 Score = 165 bits (182), Expect = 2e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| |||| ||||| || ||||||||||| || || || || || || || || Sbjct 618757 CAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTC 618816 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| ||||| || ||||||||||| Sbjct 618817 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 618876 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | |||||| || |||||||| | ||||| |||||||| |||||||| Sbjct 618877 TTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 618936 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | ||||| ||||| Sbjct 618937 CTTACCAGTCAAAGTCTTAACGAA 618960 >seq9 Length=430042 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| | ||||| |||||||| ||||| || || || | || || || || Sbjct 70450 CAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTC 70391 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| ||||| || ||||||||||| Sbjct 70390 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 70331 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||||| |||||| || || ||||| | ||||| |||||||| |||||||| Sbjct 70330 TTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 70271 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | |||||||| || Sbjct 70270 CTTACCAGTCAAAGTCTTGACAAA 70247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921620913883880