Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740455.1_202016-09-
21] 129 sequences; 11,993,383 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq9 118 3e-21
seq6 114 3e-20
seq4 89.7 1e-12
>seq9
Length=430042
Score = 118 bits (130), Expect = 3e-21
Identities = 394/607 (65%), Gaps = 7/607 (1%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
||||| || ||||| || || || ||| | || || || | | || || || |
Sbjct 235442 TATTTCGGATTCAAGACACTGGAGCGTTCGTACTTGCTAAGACTGAACGGTGAAGTGGCA 235383
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||||||||||| || || | | ||||| ||| | ||||| ||||| ||||| ||
Sbjct 235382 GAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTAGGTATCCATGGTAGCGATATCGAA 235323
Query 110424 GCTGTTATTGAATGTTATGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTAC 110482
|||| | | |||| || | || || || | | | | ||| ||| | || ||
Sbjct 235322 TCTGTGCTGAAGACTTATAATTTGATGTCGTTAAGATACTTC-ACTCACGCTTCCCCAAC 235264
Query 110483 CCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTA 110541
|||| ||||| || || ||| || |||| || |||||| | | || |
Sbjct 235263 TTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATG-TTTCTTAATTGCCATGA 235205
Query 110542 ACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAA 110601
| ||||| ||||| ||||||||||||||| || | |||||| |||| | ||||| ||||
Sbjct 235204 AGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAAA 235145
Query 110602 ACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA 110661
| || || ||||| |||| | | | || || || | ||| | |||||||
Sbjct 235144 CTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTCTTATATCGCTG 235085
Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721
| || ||| |||||| || | |||| ||| | | || ||||| | |||||
Sbjct 235084 GTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATACTGCCC 235025
Query 110722 AATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTT 110778
|||||| | || |||||| |||||| ||| | || || | | | || || |
Sbjct 235024 GTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGGAGCCAT 234965
Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838
||||| ||||||| || || || | || | | |||| || || ||||||
Sbjct 234964 GGCATGCAGATATCTTCGACTTTGTCGATATCAGAAAAACACATGGTAAGGAAGAAATTC 234905
Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898
| ||| | ||||| || ||| | ||||| | ||| | |||||||||||||||||||
Sbjct 234904 GTGCAAGAGATTTGTTCCCTGCTCTATGGATCCCTGATCTTTTCATGAAACGTGTTCAAG 234845
Query 110899 AAAATGG 110905
| ||||
Sbjct 234844 AGGATGG 234838
>seq6
Length=295955
Score = 114 bits (126), Expect = 3e-20
Identities = 551/866 (64%), Gaps = 20/866 (2%)
Strand=Plus/Plus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
||||||||||| |||||| | |||||| |||||||||| | |||| || | |
Sbjct 128908 TATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAAGTGGCC 128967
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
|||||||| ||||| | || | | || || | || || || || ||||| |
Sbjct 128968 GAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAG 129027
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483
|||| | | ||| ||| | | | | ||| | || ||| || |||| ||
Sbjct 129028 GCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCTCCAACG 129087
Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTAA 110542
| || || || || ||| | ||| || | ||||| |||||| | | || ||
Sbjct 129088 TTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTG-TTTCTTGGTTGCCATGAA 129146
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602
|| || ||||| || || ||||| || | | || ||| |||| | ||||| ||||
Sbjct 129147 GGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAAC 129206
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662
|||| || |||||| | || | ||| | ||||| |||| || | | || ||
Sbjct 129207 TGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGG 129266
Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722
| || ||| |||| | || | |||| ||| | | || ||||| |||| ||
Sbjct 129267 TACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAATAACACCGCCCG 129326
Query 110723 ATATGTGAATCAAGGTGGTAAGAGAAA---TGGCTCATTTGCTATCTATCTCGAACCTTG 110779
||||| | || |||||||| | || ||| | ||||| | || || ||||| ||
Sbjct 129327 TTATGTTGACCAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATG 129386
Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA- 110838
|||| | ||||||||||| || | || || | || || || || | |||| |||
Sbjct 129387 GCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGG---TAAAGAGGAAAT 129443
Query 110839 --GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896
| ||| | ||||| || ||| | |||||| | ||| | |||||||| ||||| |
Sbjct 129444 TCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGA 129503
Query 110897 AGAAAATGGCATGTGGTCTCTTATGTGTCC-TCATCGTTCTCCTGGTCTATCTGATGTAT 110955
||||||||| | ||| | | | | ||| |||| |||||||| || ||| |
Sbjct 129504 AGAAAATGGGACCTGGACATTATTCTCTCCAACATC-AGCTCCTGGTTTAAGCGATTGTT 129562
Query 110956 ATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG-CAAGTTTCG-CAA 111013
| || | |||||||| | || || || || |||||||| | | | | | |
Sbjct 129563 ACGGTGACGAGTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCGTGGTAAGACTA 129622
Query 111014 ACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAAC 111073
||| ||| ||| || | |||| || | ||| | ||| ||||||||| ||
Sbjct 129623 TCAA-----AGCCCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTAC 129677
Query 111074 TCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAAC 111133
|||| || | || || ||| | ||| | ||||||||||||| || |||||
Sbjct 129678 ACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGT 129737
Query 111134 AATTAAGTCTAGTAATTTGTGCTGTG 111159
|| ||||| || || |||||||
Sbjct 129738 CATCAAGTCATCAAACTTATGCTGTG 129763
>seq4
Length=1474736
Score = 89.7 bits (98), Expect = 1e-12
Identities = 126/175 (72%), Gaps = 4/175 (2%)
Strand=Plus/Minus
Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGG--AATTATGCAGGCAT 304943
|| |||| |||| |||| || | ||||||||||| |||||||| || | || ||
Sbjct 210655 TTGCAATTTCATGTTGCCACTTATATGGATAATGATATTGCTGGTCAACCA--CAAGCTC 210598
Query 304944 CTCAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTC 305003
||||| || ||| | || | || |||| | || | || |||||||||||||
Sbjct 210597 TTCAAAAGTCCGGCCGTCCCGTTAAATCTATTCGTGCTCGTTTGAAGGGTAAAGAGGGTC 210538
Query 305004 GTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAAT 305058
|||| |||||||| ||||||| || ||||| |||||| ||||||| ||| ||
Sbjct 210537 GTATCAGAGGTAATTTAATGGGTAAGCGTGTGGATTTTTCGGCAAGAACTGTTAT 210483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186810838420969
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |