Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740535.1_202016-09- 21] 283 sequences; 12,127,061 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq12 114 3e-20 seq11 100 7e-16 >seq12 Length=1051956 Score = 114 bits (126), Expect = 3e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||| | | || | ||||||||||| || || || || || Sbjct 58739 TTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAACTGCTTACCGGCAAA 58798 Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||||| | ||||| |||| ||||| ||||| || ||||||||||||| || || Sbjct 58799 GATCAACCTTTGTTG---ATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAAC 58855 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||| || || | ||| ||||| || || | ||||| || || ||||||| |||||| Sbjct 58856 GTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTT 58915 Query 288459 GACGAATATCTGCAT 288473 || || |||||||| Sbjct 58916 AACAAAGATCTGCAT 58930 Score = 114 bits (126), Expect = 3e-20 Identities = 166/233 (71%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || || || || ||||| | ||| || || || || || || || | Sbjct 58932 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 58991 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 ||||| | |||||||||| || || || || ||||||| | |||||| ||||| Sbjct 58992 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGA---TCTGGA 59048 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||| ||||| || || || ||||||| || ||||| || || | |||| ||||| Sbjct 59049 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 59108 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 ||||| | || || || || ||||||| |||||||||||| |||||||| || Sbjct 59109 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 59161 Score = 113 bits (124), Expect = 1e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||| | | || | || ||||||| ||| || || || || Sbjct 58283 TTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAA 58342 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| | ||||||| ||||| ||||||||||| || ||||| ||| ||||| Sbjct 58343 AATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTT 58402 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| ||| ||||| || || || || || |||||||| || ||||| ||||| Sbjct 58403 GTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGAC 58462 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 58463 GAAAATTTGCAT 58474 Score = 104 bits (114), Expect = 6e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| | || | || ||||| ||||| || || || || Sbjct 488417 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 488358 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | ||||| | ||| || ||||| || || ||||| || | || || || Sbjct 488357 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 488298 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || ||||| ||||| || || || ||||| ||||| | ||||||||| Sbjct 488297 GTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGAC 488238 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 488237 GAAAATTTGCAT 488226 Score = 100 bits (110), Expect = 7e-16 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 ||||| |||| ||| || ||||| ||||| ||||| | ||||| | || |||||| Sbjct 58038 ACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCT 58097 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCC 288381 | |||||| || || || |||| | || || ||||| || ||||| || || Sbjct 58098 AGTTGTTTACCGGCAAAAATCAATCTTTGCTGG---TCTGGAGGAATACCTTCCTTGTCT 58154 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 || ||||| | || ||||| || |||| || ||||| || || || || || ||| Sbjct 58155 TGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTC 58214 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||||||||| || ||||| Sbjct 58215 TTACCTGTCAGTGTCTTGACGAAAATTTGCAT 58246 >seq11 Length=651277 Score = 100 bits (110), Expect = 7e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || ||||| | || || | |||||||| ||||| || || || || Sbjct 623956 TTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAA 624015 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | ||||| | |||||| ||||| || || ||||| || | || || || Sbjct 624016 GATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 624075 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || ||||| ||||| | ||||| ||||| || |||| |||||| || Sbjct 624076 GTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAAC 624135 Query 288462 GAA 288464 ||| Sbjct 624136 GAA 624138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179650122646874