Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740535.1_202016-09-
21] 283 sequences; 12,127,061 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq12 141 7e-29
seq11 91.5 1e-13
>seq12
Length=1051956
Score = 141 bits (156), Expect = 7e-29
Identities = 176/236 (75%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||||||||| |||||| || |||||||||||||||||
Sbjct 58697 TTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTA 58756
Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
|| | | || | | |||| || | |||||| |||||||||||||| | || ||||
Sbjct 58757 GTCAGACAAGGTTCTAC-CGTCTTCTAACTGCTTACCGGCAAAGATCAACCTTTGTTGAT 58815
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCG 44281
||| ||| | ||||||||| ||| || ||| ||| || ||| | || ||||||| |
Sbjct 58816 CTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTT-AACGTTATCGATCGTGTCGGAG 58874
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| | || || || || || || | ||||| || ||||| |||||
Sbjct 58875 GATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 58930
Score = 123 bits (136), Expect = 2e-23
Identities = 170/235 (72%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||||||||| || | ||| ||| || || ||||| ||
Sbjct 58469 TTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATA 58528
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| | || | |||| ||||| ||||| |||||||||||||| | || |||||
Sbjct 58529 ATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATC 58588
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGG 44282
|| ||| | ||||||||| || || ||| ||| || ||| | || ||||| | |
Sbjct 58589 TGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTT-AACGTTGTCAATAGTGTCAGAAG 58647
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| ||||| | || || ||||| || || || ||||| || || ||||||||
Sbjct 58648 ATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 58702
Score = 118 bits (130), Expect = 8e-22
Identities = 172/237 (73%), Gaps = 6/237 (3%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| |||||||||||||||||| || |||||||||||||||||
Sbjct 58241 TTGCATACCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTA 58300
Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
|| | | || | | | || || || ||||| || ||||| ||||| | ||| ||||
Sbjct 58301 GTCAGACAAGGT-TCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGAT 58359
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTT-CTGCTTCAATGTT-CCTATGGTGTCGGC 44280
| | ||| | |||||| || || || || || || | ||| | || |||||||
Sbjct 58360 CCGGAGGGATACCTTCTTTATCTTGAATTTTACT--TTTGACGTTGTCAATAGTGTCGGA 58417
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| | || || ||||| || || || || || ||||| ||||||||
Sbjct 58418 AGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 58474
Score = 114 bits (126), Expect = 9e-21
Identities = 168/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || || | ||| || || | ||| |||||| || |||||||||||
Sbjct 58928 CATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATC 58987
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || | |||| || |||||||| |||||||||||||| | || |||||||
Sbjct 58988 AGACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGG 59047
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
||| | ||||||||| || || ||| ||| || ||| | ||||| |||| ||||
Sbjct 59048 AGGGATACCTTCCTTGTCTTGAATTTTCGACTT-AACGTTGTCGATGGTATCGGAAGATT 59106
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
| || |||| || || || || || || | ||||| ||||| || ||||| ||
Sbjct 59107 CAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 59161
Score = 109 bits (120), Expect = 4e-19
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||||| |||||| |||| ||| || || ||||||||||||||||| ||||
Sbjct 488452 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 488393
Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
| ||| | | || |||| ||||| || ||||||||||| | || || || | |
Sbjct 488392 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 488335
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | ||||||||| || ||||| ||| || ||| | || ||||| | |||||
Sbjct 488334 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATAGTGTCAGAAGATTC 488277
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||| ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 488276 AACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 488226
>seq11
Length=651277
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/226 (70%), Gaps = 8/226 (4%)
Strand=Plus/Plus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||| | |||||| |||| || | ||| || |||||||||||||| ||
Sbjct 623918 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCTTTTTGGATGTTGTAGTCA 623977
Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| ||||| | |||| |||| ||||| || ||||||||||| | || || || |
Sbjct 623978 GATAGAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAG 624035
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283
|| | ||||||||| || ||||| ||| || ||| | |||||||| | ||
Sbjct 624036 GTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATGGTGTCAGAAGA 624093
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329
||| || |||| || || ||||| || || | ||||| ||||||
Sbjct 624094 TTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 624139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359989158370611
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |