Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740565.1_202016-09-
21] 225 sequences; 12,060,817 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq12 163 4e-35
seq11 113 7e-20
seq9 107 3e-18
>seq12
Length=1043910
Score = 163 bits (180), Expect = 4e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| | || || || ||||| || |||| || ||| |||
Sbjct 62756 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 62697
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||||| |||| |||||| ||||| || ||||| || |||||||| |||
Sbjct 62696 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 62637
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| |||||||||||| || ||||| ||||| | || ||||||||
Sbjct 62636 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 62577
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| |||||| | ||| | ||||| ||||| ||||| ||||| |||
Sbjct 62576 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGT 62529
Score = 149 bits (164), Expect = 9e-31
Identities = 172/230 (75%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| | || || || ||||| || |||| || ||| |||
Sbjct 62528 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 62469
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||||| |||| ||| || |||||||||||||| || ||||| || |||
Sbjct 62468 GACACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 62409
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| |||||||||| ||| |||||||| || |||||| ||||| || || || || |
Sbjct 62408 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACA-- 62351
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| || | || ||||| || ||||| ||||| ||||| |||
Sbjct 62350 ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 62301
Score = 140 bits (154), Expect = 5e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || ||| |||| || || ||||| || |||| || ||| ||||
Sbjct 62300 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 62241
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||||| || ||||| ||||| || ||||| || |||||||| ||
Sbjct 62240 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 62181
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| |||||||||||| || |||||| ||||| | || || || |||
Sbjct 62180 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 62121
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || ||| ||| | || ||||| | || || || || || || |||
Sbjct 62120 AT-TCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGT 62073
Score = 134 bits (148), Expect = 2e-26
Identities = 176/243 (72%), Gaps = 2/243 (1%)
Strand=Plus/Minus
Query 155810 TTTATGTAATAAA--ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTA 155867
|||| ||||| | ||||| || || | || || ||||| || ||||| || |||||
Sbjct 63227 TTTAACTAATAGATTATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTG 63168
Query 155868 GAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGC 155927
||||| ||| ||| |||| || ||||| || ||||| ||||| || |||||
Sbjct 63167 GAAGTTGAATCTTCCGATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGT 63108
Query 155928 ATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACT 155987
|| |||||||| |||||||||||||| | ||||||||||||||| ||||| |||||
Sbjct 63107 ATCCCTCCAGATCAACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACG 63048
Query 155988 TTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGC 156047
| || ||||| || || || ||| | || | ||| | ||| |||| |||||||
Sbjct 63047 CTGTCTGATTACAACATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGT 62988
Query 156048 GGT 156050
|||
Sbjct 62987 GGT 62985
Score = 125 bits (138), Expect = 1e-23
Identities = 167/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| |||| || ||||| || ||||| || || ||||| || ||| ||
Sbjct 62984 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 62925
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || ||||| || || || ||||| || |||||||| |||
Sbjct 62924 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 62865
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || ||||| | ||||||||||||||| ||||| ||||| || || || || |
Sbjct 62864 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACA-- 62807
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| || | || ||||| || ||||| ||||| ||||| |||
Sbjct 62806 ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 62757
Score = 120 bits (132), Expect = 4e-22
Identities = 168/234 (72%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || | || || || || || || |||||||| | ||||| ||| |
Sbjct 493559 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 493618
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||| | |||| || || || || || ||||| || ||||| || || || ||
Sbjct 493619 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 493678
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| |||||||| | |||||| |||||||| || || ||
Sbjct 493679 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 493738
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| || | || || || || || || ||||| ||||| ||||
Sbjct 493739 A--ACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGTG 493790
>seq11
Length=646753
Score = 113 bits (124), Expect = 7e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895
|||| || |||||||| || || || || || ||||| ||| |||||| | ||| |
Sbjct 619672 TTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACA 619613
Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955
| || || || || ||||| || ||||| || || || || |||||||||||||| |
Sbjct 619612 ATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 619553
Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAGG 156015
||| |||||||| | ||||| |||||| |||| || || || || |||||
Sbjct 619552 TTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAAGAAT 619493
Query 156016 CGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| || | ||||| || || ||||||||||| |||
Sbjct 619492 CCACTTTACATTTGGTCTTGAGATTAAGAGGTGGT 619458
>seq9
Length=434727
Score = 107 bits (118), Expect = 3e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891
||| | || || |||||||| || || || || || ||||| ||| |||||| | ||||
Sbjct 73674 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 73733
Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951
|| || || || || ||||| || ||||| || || || || ||||||||||||
Sbjct 73734 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 73793
Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011
|| | ||| |||||||| | ||||| ||||| || || || || || || |||
Sbjct 73794 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 73853
Query 156012 GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| | || | || ||||| || ||||| ||||| |||
Sbjct 73854 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGT 73892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731869941610000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |