Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740655.1_202016-09- 21] 261 sequences; 12,185,411 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq12 125 6e-24 seq9 100 2e-16 >seq12 Length=1054508 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| |||| || || | || ||| | || || || | | Sbjct 59765 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 59706 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | |||||| || ||| || |||||||| || ||||| |||||| Sbjct 59705 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 59646 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||||| | || |||||||| ||||||| |||| | | || || ||| Sbjct 59645 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 59586 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| |||||||| |||| | ||||| ||||||||||| || Sbjct 59585 ATCCAAAAGGAATCTACTCTTCACCTGGTGTTGAGATTGAGAGGTGG 59539 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || ||| | || || || | || ||| | || || || | Sbjct 59993 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 59934 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || || ||| ||| ||||| ||||| || ||||| |||||| Sbjct 59933 GACACTATTGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 59874 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||| | | ||| |||||||| ||||| | |||| | ||||||||| Sbjct 59873 CAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 59814 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| ||||| | ||||| ||||| ||||||||||| || Sbjct 59813 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 59767 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || || || ||| | || || | || || || || | Sbjct 60221 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 60162 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || || || ||||| ||||| || ||||| |||||| Sbjct 60161 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 60102 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | | ||| ||||| || ||||| | |||| | | || || ||| Sbjct 60101 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 60042 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| |||||||| |||| || ||||| ||||||||||| || Sbjct 60041 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 59995 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| |||||| | || || || || ||||| || || | |||||| | ||||| || | Sbjct 496579 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATC 496638 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 ||||| || || | ||||| ||||| ||||| ||||| || || || || Sbjct 496639 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 496698 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||||| ||| |||| | | || |||||| | ||||||| |||| | ||| || Sbjct 496699 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 496758 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| |||||||| | || || || || ||||||||||| || Sbjct 496759 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 496809 >seq9 Length=436817 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 ||||| || || || ||||| || | || || | ||||| || | ||||| || Sbjct 70155 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 70214 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | ||||| ||||||| ||||| ||||| || || || || ||||| ||| || Sbjct 70215 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 70274 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | | || |||||| | ||||| | |||| | | || || |||||||||||| Sbjct 70275 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 70334 Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || | || ||||| || ||||||||||| || Sbjct 70335 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 70372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429934632400455