Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740655.1_202016-09- 21] 261 sequences; 12,185,411 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq12 122 2e-22 seq9 120 7e-22 seq11 98.7 2e-15 >seq12 Length=1054508 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || || || ||||||| ||| ||||||||| | || || ||| Sbjct 496607 ACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCC 496666 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| ||| || ||| |||||| | ||||| || || ||| Sbjct 496667 AAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 496726 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| || |||||| |||| |||||| |||| || || |||||||| ||| Sbjct 496727 CAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATCCAAAAGGAATCTACTCTACAC 496786 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 496787 TTGGTCTTGAGA 496798 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || ||||| || || || || | || || ||| ||||||||| | || Sbjct 59523 CAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGACACTATTGACAA 59464 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||| |||||||| || ||||| ||| || ||| |||||| | ||||| Sbjct 59463 CGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATTGATCTT 59404 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||| || || | |||||||| || || || | || ||||| | || || ||||| Sbjct 59403 TGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATTCAAAAGGAGTC 59344 Query 206364 TACTCTTCACCTTGTTTTGAG 206384 ||||||||||| || ||||| Sbjct 59343 CACTCTTCACCTCGTCTTGAG 59323 Score = 102 bits (112), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| || ||||| || || || || | || || ||| ||| ||||| | || Sbjct 59751 CAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAA 59692 Query 206244 AGT--AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATC 206301 || |||| |||| ||||||| |||||||| || ||||| || ||| | || Sbjct 59691 CGTCAAAAGTAAAA--TTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATT 59634 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 || || || ||||| | |||||||| || || ||| | || |||||| |||| || || Sbjct 59633 TTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAA 59574 Query 206362 TCTACTCTTCACCTTGTTTTGAGA 206385 |||||||||||||| || |||||| Sbjct 59573 TCTACTCTTCACCTGGTGTTGAGA 59550 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || || ||||| || || || || | || || ||| ||||||||| | Sbjct 59985 TTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGACACTAT 59926 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| ||| |||||||| || ||||| ||| || || |||||| | Sbjct 59925 TGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATT 59866 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||||| ||||| ||||| ||||||| || || || || | ||||| ||| | ||||| Sbjct 59865 GATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAA 59806 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||||||||| | || | || |||||| Sbjct 59805 AGAGTCTACGTTGCATTTGGTGTTGAGA 59778 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | || || ||||| |||||||| || || ||| || ||| Sbjct 60218 CAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCCGAC 60159 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| || || || || || ||||| || || || || Sbjct 60158 ACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAACAG 60099 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||| ||||| |||||| | ||||| || || || ||| | || |||||| || Sbjct 60098 AGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAACATC 60039 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || || |||||||||||| | || |||||| Sbjct 60038 CAAAAGGAATCTACTCTTCACTTGGTGTTGAGA 60006 Score = 86.0 bits (94), Expect = 1e-11 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816 |||||| || | |||||||||||| || || |||| || ||||||| ||| || || || Sbjct 60006 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 60065 Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||||| |||||||| ||||| ||||| | || |||||| Sbjct 60066 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGA 60105 >seq9 Length=436817 Score = 120 bits (132), Expect = 7e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || || || |||||||||||||| ||| ||||||||| | Sbjct 70154 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 70213 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| |||||||||||| || ||||| || || ||| |||||| | Sbjct 70214 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 70273 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||||| || || ||||| |||||||| || || || ||| | || |||||| | || || Sbjct 70274 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 70333 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||| || ||| | ||| | || |||||| Sbjct 70334 AGAATCCACTTTGCACTTAGTCTTGAGA 70361 >seq11 Length=653825 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||||||||||| ||| ||||||||| | || || ||| Sbjct 623155 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACAATGTCAAGTCC 623096 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| || || ||| |||||| | ||||| || || ||| Sbjct 623095 AAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 623036 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||| || || ||| | | || |||||| |||| || || || ||| | || Sbjct 623035 CAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAATCCACTTTACAT 622976 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 622975 TTGGTCTTGAGA 622964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181816847917381