Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740655.1_202016-09-
21] 261 sequences; 12,185,411 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq12 174 4e-38
seq9 159 8e-34
seq11 158 3e-33
seq2 91.5 4e-13
>seq12
Length=1054508
Score = 174 bits (192), Expect = 4e-38
Identities = 170/219 (78%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| ||||| ||||| ||||||| ||||| |||| ||||||||| ||
Sbjct 496798 TCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 496739
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| ||||| ||||| | || ||||||||| || ||||||||||||||
Sbjct 496738 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 496679
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || || ||||| || | ||| || || | || ||
Sbjct 496678 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAAT 496619
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || ||||| || | ||| | |||||| ||
Sbjct 496618 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 496580
Score = 149 bits (164), Expect = 1e-30
Identities = 162/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558
|||| ||| ||||| |||||||| || ||||| | |||||| || | || ||||| |||
Sbjct 59323 CTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 59382
Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618
|||||||| || || || || ||||| | || ||| ||||| || |||||||||||||||
Sbjct 59383 TCTTCTAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 59442
Query 225619 TCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATC 225678
||||| || ||| ||| || || || ||||| || | ||| || |||| || ||
Sbjct 59443 TCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 59502
Query 225679 GTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || |||| || || | ||| | ||||||
Sbjct 59503 GTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 59537
Score = 147 bits (162), Expect = 5e-30
Identities = 153/201 (76%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| ||||| ||||| ||||||| ||||| || | ||| ||||| ||
Sbjct 60006 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 60065
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||||||||||| || || ||||| | | ||||| || || || |||||||||||
Sbjct 60066 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 60125
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||| ||||| || ||| || ||||| ||||| |||| ||| || ||||| |||||
Sbjct 60126 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 60185
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
|| || || |||||||| ||
Sbjct 60186 GGTTTTACCGGTCAAAGTCTT 60206
Score = 132 bits (146), Expect = 1e-25
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || ||||| ||||| ||||| ||||||| ||||| || | ||| ||||| ||
Sbjct 59550 TCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 59609
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||||||| ||||| ||||| || || | || ||||| || || || |||||||| ||
Sbjct 59610 ATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTT 59669
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||| || || || || || || ||||| || | ||| || |||| || ||
Sbjct 59670 ATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 59729
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || | |||||| | ||| | ||||||
Sbjct 59730 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 59765
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| || || ||||| || | ||||| || || || | |||||||| | || |||||
Sbjct 60232 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 60291
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| |||||||||||||| || || ||||| | || |||||| || || || |||||||||
Sbjct 60292 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 60351
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|||||||| || || ||| || |||||||| || || | ||| || || || ||
Sbjct 60352 TTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTT 60411
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || || |||||||| || | ||| | |||||
Sbjct 60412 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 60449
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| || ||||| || | || ||||| | || ||||| || ||||| || ||||| ||
Sbjct 59797 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 59856
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|| ||||| | || |||||| || || |||||||||||||||||||| || ||| |||
Sbjct 59857 GCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTTGACTTA 59916
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
|| || || ||||| || | ||| || |||| || || ||||| || |||| ||
Sbjct 59917 ACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTC 59976
Query 225697 TTTATGAACACTTGCAT 225713
|| | || | ||||||
Sbjct 59977 TTGACAAAAATTTGCAT 59993
>seq9
Length=436817
Score = 159 bits (176), Expect = 8e-34
Identities = 156/201 (78%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| | ||||||||||||||| | ||||| || | ||| ||||| ||
Sbjct 70361 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 70302
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| ||||| ||||| | || ||||||||| || || |||||||||||
Sbjct 70301 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 70242
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| |||||| ||| ||| || || ||||| || | ||| || || || |||||
Sbjct 70241 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 70182
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
||||| || |||||||| ||
Sbjct 70181 GGTCTTACCAGTCAAAGTCTT 70161
>seq11
Length=653825
Score = 158 bits (174), Expect = 3e-33
Identities = 159/207 (77%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | || | ||||||||| ||||||| ||||| || | | |||||| ||
Sbjct 622964 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 623023
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| ||||| ||||| | || ||||||||| || || |||||||||||
Sbjct 623024 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 623083
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || |||||||| || | ||| || || || |||||
Sbjct 623084 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 623143
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704
||||| || |||||||| || | |||
Sbjct 623144 GGTCTTACCAGTCAAAGTCTTAACGAA 623170
>seq2
Length=804247
Score = 91.5 bits (100), Expect = 4e-13
Identities = 80/100 (80%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || |||||||| || || |||||||| || ||||||||
Sbjct 31101 GAAAATTTGACCATCGGTAATGGAAATAACATTGGTTGGAATATAAGCGGAGACATCACC 31042
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCA 4569
|||| ||||| | |||||| || || |||| || |||
Sbjct 31041 ACCTTGGGTTTCAATAACAGGCAAAGCAGTTAAAGAACCA 31002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192527212101134
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |