Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740665.1_202016-09- 21] 380 sequences; 12,293,473 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq98 100 3e-16 seq12 100 3e-16 seq9 82.4 8e-11 >seq98 Length=763 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||||||||| |||||||| || || | || || ||||||||||||| | Sbjct 94 GACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGTTTACCGGCA 153 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| | | || ||||| ||||| |||||||| ||||| ||| |||||| |||| Sbjct 154 AAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC-TTGAATTTTTGACTTAAC 212 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | || || ||||| | || | || ||||| ||||| || | Sbjct 213 GTTG-TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCT 271 Query 138599 TTACAAAAATCTGCAT 138614 | || ||||| ||||| Sbjct 272 TGACGAAAATTTGCAT 287 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || | || | | || |||||||| ||||||||||| | Sbjct 289 CCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 348 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || ||||| ||||| | | | || | | |||||| |||||||| Sbjct 349 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 408 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||||||||| || ||| |||| |||| | ||| || | ||||||| || || | Sbjct 409 ATACCTTCTTTATC-TTGAATTTTACTTTTGACGTTG-TCAATAGTGTCGGAAGATTCAA 466 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || || || |||||||| || ||||| ||||| Sbjct 467 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 515 >seq12 Length=1067197 Score = 100 bits (110), Expect = 3e-16 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 138411 ATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTG 138470 ||||| | | |||||||| ||||||||||| || || || | ||| || || || Sbjct 65739 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 65798 Query 138471 TTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTT 138530 ||||||| | |||| | | ||||| || ||||| |||||||| ||||| ||| ||| Sbjct 65799 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC-TTGAATTT 65857 Query 138531 TTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCA 138588 | | |||| ||| || | ||| |||| || || || || | || | |||||||| Sbjct 65858 TCGACTTAACGTTG-TCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCG 65916 Query 138589 GTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| ||| || || ||||||||||| Sbjct 65917 GTCAAAGTCTTGACGAAAATCTGCAT 65942 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || || | | || |||||||| ||||||||||| | Sbjct 65488 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 65547 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||| || || | ||||||| | |||| | | |||||| || ||||| Sbjct 65548 AAGGTTCTACCGTCTTCTAGCTACTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGG 65607 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| ||||| |||||| || | | || | ||||||| || || ||| Sbjct 65608 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 65667 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | |||||||| |||| ||| || ||||| |||||||| Sbjct 65668 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 65714 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||||||||| |||||||| || || | || || ||||| ||||||| | Sbjct 65293 GACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCA 65352 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || | | || ||||| ||||| |||||||| ||||| ||| |||| | |||| Sbjct 65353 AAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC-TTGAATTTTCGACTTAAC 65411 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | || || ||||| | || | || ||||| ||||| || | Sbjct 65412 GTTG-TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCT 65470 Query 138599 TTACAAAAATCTGCAT 138614 | |||||||| ||||| Sbjct 65471 TGACAAAAATTTGCAT 65486 >seq9 Length=435738 Score = 82.4 bits (90), Expect = 8e-11 Identities = 153/221 (69%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| ||||| || | | || || ||||||||||||||||| | Sbjct 70802 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 70743 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||| || | ||| ||||| | | |||| | | |||||||| || || Sbjct 70742 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 70683 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| | |||| || |||| || | ||||| | || || | Sbjct 70682 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 70625 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606 | || | || | || |||||||||| ||| || |||||| Sbjct 70624 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 70584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260042753600