Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740675.1_202016-09- 21] 287 sequences; 12,104,117 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5 320 2e-82 >seq5 Length=560173 Score = 320 bits (354), Expect = 2e-82 Identities = 915/1389 (66%), Gaps = 42/1389 (3%) Strand=Plus/Plus Query 75227 ATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 75286 ||| | |||||| | ||||||||||| ||| || || ||| || || || || || Sbjct 298718 ATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAGGCTGCTTTAGAAACGTATAAC 298777 Query 75287 AAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 75345 |||||| | || ||| || | |||||| | ||||| | |||||||| ||||| || Sbjct 298778 TTGATGTCTCTAAAATATTTT-ACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCC 298836 Query 75346 AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 75405 || ||| || |||||| ||| ||| | | |||| ||||||||||| ||| | || || Sbjct 298837 AAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGAT 298896 Query 75406 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 75465 || | || | | ||| ||||| || || || ||||| |||||||| | || Sbjct 298897 TTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 298956 Query 75466 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 75525 |||||| | | | | | | ||| ||| || ||||| ||| || | || Sbjct 298957 TATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAACGG 299016 Query 75526 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCG 75585 | | ||||| ||| |||| || || || ||| || || ||||| | || | || Sbjct 299017 TTTAATTCCTATGATTCGTGTTTTCAATAACACCGCCCGTTATGTTGACCAGGGTGGTAA 299076 Query 75586 TCGCAAGG---GGTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGT 75641 | ||| ||| | | || | ||| |||||||||||||||| ||||| | || | Sbjct 299077 TAA-AAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGATT 299135 Query 75642 TCCTTGAG-TTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCA 75700 | |||| ||| || ||||| ||| | || || ||| |||||| | || | Sbjct 299136 TTATTGATATTAGGAAG-AACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCT 299194 Query 75701 TCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTT 75760 | || |||||||| || |||||||||||||| || || || ||| ||| | | Sbjct 299195 GCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTA 299254 Query 75761 TTCTGTCCAGACAAG-GCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCT 75819 |||| |||| ||| || || ||| | ||| ||||| |||||||| || || Sbjct 299255 TTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCT 299313 Query 75820 CTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTG 75879 || || || || | || ||| | | || |||| | |||| | | || Sbjct 299314 ATATACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTATG 299370 Query 75880 GAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGC 75939 | | | ||| | || | || || || ||||| ||||| | | ||||||||||||| Sbjct 299371 GTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGC 299430 Query 75940 TTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCAC 75999 |||||||| || ||| ||||| || || || |||||| ||||| | ||| Sbjct 299431 TTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGCTG 299490 Query 76000 GGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGC 76059 |||||| | || ||| ||| | ||||| || |||||||| || ||||| || | || Sbjct 299491 TGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGC 299550 Query 76060 CCTTCCAAAGTATGTCAATGAAG---------------AGACTCGCACTTTTGATTATGA 76104 | | ||| | || ||| |||| ||||| ||| | | | | Sbjct 299551 CTTACCA--GCAT-TCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTCAA 299607 Query 76105 AAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAA 76164 |||| | |||||||| | || ||||||| ||| ||||| |||||||||| | || Sbjct 299608 AAAATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAA 299667 Query 76165 TTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGG 76224 || || || ||||| ||| |||| || |||||| |||| ||||| |||| |||||| Sbjct 299668 TTACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGG 299727 Query 76225 TGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGC 76284 ||||||||||||||| || || || ||| || | |||||||||| || ||||| Sbjct 299728 TGTTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGC 299787 Query 76285 CAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTG 76344 | | | ||| | ||||||||||| || ||||| || ||| |||| || ||| Sbjct 299788 CCGTTTGCTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTG 299847 Query 76345 TGAATTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAA 76402 |||| | ||| |||| | ||| | || || || || | || ||||| || || ||| Sbjct 299848 TGAACTAGCTCAGAAG--GACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTCAA 299905 Query 76403 GGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACGACTGGGATGTT 76462 || | || ||||||||||||||||| || || | || | || ||||| Sbjct 299906 GGTATACTACAGTTTGATATGTGGGACCAAAAACCCTACGGCATGTGGGATTGGGA-CAC 299964 Query 76463 CTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATG 76519 || ||| || | |||| | || | ||| || | | | || || |||||||||||| Sbjct 299965 CTTAAGAAAAGATATCATGAAGCATGGTATTAG--AAATTCCTTGACCATGGCACCAATG 300022 Query 76520 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACA 76579 || || || ||||| | ||||| |||||| |||||||||| || |||||| ||| | Sbjct 300023 CCTACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACCAGTCACTTCC 300082 Query 76580 AACATCTAC 76588 || || ||| Sbjct 300083 AATATGTAC 300091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567459806560