Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740705.1_202016-09-
21] 267 sequences; 12,092,408 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq12 161 1e-34
seq9 114 1e-20
seq11 105 7e-18
>seq12
Length=1045917
Score = 161 bits (178), Expect = 1e-34
Identities = 174/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || |||||| | ||| || || ||||||||||| ||||||||||| | |
Sbjct 62020 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 62079
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || || || || || ||||||||||| | ||| ||||| || ||
Sbjct 62080 AAGGTTCTACCA-TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 62138
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| ||||||||||| |||||| ||| | |||||||| ||||| ||
Sbjct 62139 GATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 62198
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || || |||| |||||| ||||||||||||||
Sbjct 62199 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 62246
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || |||||| | ||| || || ||||||||||| ||||||||||| | |
Sbjct 62476 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 62535
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| ||| | ||| || ||||| || || ||||| ||||| | ||| ||||| || ||
Sbjct 62536 AA-GGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 62594
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || || || ||||| || || || | |||||||| ||||| ||
Sbjct 62595 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 62654
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| |||||||||||||| ||||| ||||| || || |||||
Sbjct 62655 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 62702
Score = 136 bits (150), Expect = 4e-27
Identities = 171/232 (74%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545
|| ||||| | || ||| || | |||||| || ||||||||||| |||||||||||| |
Sbjct 493486 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 493427
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | || || || ||||| ||||| | || || || || ||
Sbjct 493426 AAAGTTCTACCA-TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 493368
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||| || || ||||| ||| | ||||| || ||||| ||
Sbjct 493367 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 493308
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || ||||| || |||||||||||||| || |||||||||||||| |||
Sbjct 493307 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 493256
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || |||||| | || | ||| || || || |||||||| || || | |
Sbjct 62248 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 62307
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| || | | | ||| || || || || || ||||||||||| | || ||||| || ||
Sbjct 62308 AGCGTTCT-ACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 62366
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||||||||| |||||| ||| | |||||||| ||||| ||
Sbjct 62367 AATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 62426
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || || |||| |||||| ||||||||||||||
Sbjct 62427 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 62474
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| || | | ||| || |||| ||||| ||||| ||||||||||| || | |
Sbjct 62704 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 62763
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| || | | | ||| || ||||| || || ||||| ||||| | || ||||| || ||
Sbjct 62764 AGCGTTCT-ACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 62822
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||||||||| || || ||| | || ||||| ||||| ||
Sbjct 62823 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 62882
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | || |||||||||||||| ||||| || |||||||| |||||
Sbjct 62883 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 62930
Score = 118 bits (130), Expect = 1e-21
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGT 134559
||| || ||||| || ||||| ||||||||||| |||||||| | || || | | | |
Sbjct 61806 CAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA-T 61864
Query 134560 CGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTT 134619
| || || || || || ||||||||||| | ||||| || || || || ||||| || |
Sbjct 61865 CTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGT 61924
Query 134620 CTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGG 134679
|||||||||| || || ||| | ||||| || ||||| || || || || || |
Sbjct 61925 CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAG 61984
Query 134680 TTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| ||||| || | || || || |||||||||||
Sbjct 61985 TCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 62018
>seq9
Length=434946
Score = 114 bits (126), Expect = 1e-20
Identities = 159/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | ||| | |||||||| ||||||||||||||||| | |
Sbjct 72527 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 72468
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| ||| | ||| || | || || || ||||| ||||| | || || || || ||
Sbjct 72467 AA-GGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 72409
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || |||||||| ||| ||||| ||| | ||||| || ||||| ||
Sbjct 72408 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 72349
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705
|| | ||| ||||| ||||| || ||||| || || |||
Sbjct 72348 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 72309
>seq11
Length=652181
Score = 105 bits (116), Expect = 7e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | || ||| || | |||| |||||||||||||| |||||||||||
Sbjct 624881 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 624940
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | ||| || | || || || ||||| ||||| | || || || || ||
Sbjct 624941 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 625000
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || ||||| || || ||||| ||| | ||||| || ||||| ||
Sbjct 625001 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 625060
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAA 134704
|| | ||| ||||| ||||| || ||||| ||||||||
Sbjct 625061 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 625098
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505396713232840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |