Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740775.1_202016-09- 21] 309 sequences; 12,122,929 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5 262 5e-65 seq9 158 1e-33 >seq5 Length=553186 Score = 262 bits (290), Expect = 5e-65 Identities = 892/1372 (65%), Gaps = 42/1372 (3%) Strand=Plus/Minus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 ||||| || |||||||||| |||||| ||||| | ||||| || || |||||||||||| Sbjct 299352 GGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCC 299293 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCAG 106069 || || || | | | || ||| | | | |||| | || ||| || ||||| Sbjct 299292 ATGGTCAAGGAATTT--CTAATACCATGCTTCATGATATCTTTTCTTAAGGTG-TCCCAA 299236 Query 106070 TCGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTG 106129 || | || | || || |||||||||||||| || || | ||||| || | Sbjct 299235 TCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCA 299176 Query 106130 GGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC--AGCCAATTCACAGCTCGCCT 106187 ||||| || | || || || || | ||| | |||| ||| | |||||| || | Sbjct 299175 GGAGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGAGCTAGTTCACAAGAAGCTT 299118 Query 106188 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 106247 ||| ||| || ||||| || ||||||||||| | ||| | | |||||| || | Sbjct 299117 CCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAG 299058 Query 106248 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 ||||||||| | || ||| || || || ||||||||||||||||||||| ||| Sbjct 299057 AATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAA 298998 Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 106367 | ||||| |||| |||||| || |||| ||| ||||| || || |||| | |||| Sbjct 298997 TTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAA 298938 Query 106368 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAA 106427 |||||| ||||| ||| ||||||| || | |||||||| | ||||| | | Sbjct 298937 TGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGT 298878 Query 106428 AAGTGCGAGTCT---------------CTTCATTGACATACTTTGGAAGGGCGATTGATG 106472 | ||| ||||| |||| ||| || | ||| | ||| | || | Sbjct 298877 ATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC--TGGTAAGGCAACGGAAG 298821 Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532 |||| || |||||||| || ||||| | ||| ||| || | |||||| || |||| Sbjct 298820 CCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGT 298761 Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592 | || ||| || || || || ||||| ||| ||| |||| || |||||||||| Sbjct 298760 TTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGT 298701 Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGG 106652 | | | | | || || || || || || || | | | ||| | | ||| | || Sbjct 298700 AAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATA-ATTTT 298642 Query 106653 CGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAA 106712 || | | || | || | || || || |||||| || || || || |||| Sbjct 298641 TGG--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAA 298584 Query 106713 ACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTGGACAGAAAAGAGACCAT 106771 |||| ||||| ||| | ||| || || ||| |||| |||| | | ||| Sbjct 298583 ACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT-TGGAGAGAATAATGTCCAG 298525 Query 106772 TGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGA 106831 ||| || || || |||||||||||||| || |||||||| || | | || | | Sbjct 298524 GTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAA 298465 Query 106832 TCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA-CTCAAGGAACTCCATGAT 106890 ||||| ||| || || | ||| ||||| || ||| |||| || || | || Sbjct 298464 TCTCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAATATCAATAAAATCAAATAT 298406 Query 106891 ATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTT 106946 ||| || |||||||| || || || | || | | || |||| | ||| | | Sbjct 298405 ATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTT-TATTACCACCCT 298347 Query 106947 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 107006 | | ||||| || || ||| || || || |||| ||| ||||| | ||| | || Sbjct 298346 GGTCAACATAACGGGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAG 298287 Query 107007 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 107066 ||| ||||| || ||| ||| | | | | | | |||||| || | |||| Sbjct 298286 TACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAA 298227 Query 107067 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 107126 |||| ||||| || || || ||||| ||| | | || | || || || | || Sbjct 298226 TACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGA 298167 Query 107127 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAG 107186 | ||||||||||| |||| | | ||| ||| |||||| || ||| |||| ||||| | Sbjct 298166 TAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGG 298107 Query 107187 CATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTC 107245 ||||||| | ||||| | |||||| | || ||| || | |||||| || || || Sbjct 298106 CATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAGAGACATCAAGTTATACGTT 298048 Query 107246 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297 || || ||| || || ||| ||||||||||| | || || | ||||| Sbjct 298047 TCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAA 297996 >seq9 Length=440079 Score = 158 bits (174), Expect = 1e-33 Identities = 871/1372 (63%), Gaps = 46/1372 (3%) Strand=Plus/Plus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 ||||| || |||||||||| ||| | ||||| | || ||||| ||||||||||||||| Sbjct 234316 GGTTCGAAACATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCC 234375 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCAG 106069 || ||||| ||| | | || | || ||| | || ||| || |||||| Sbjct 234376 ATAGTCAAAGA--GTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAAGGTT-TCCCAG 234432 Query 106070 TCGTAGTTGAGCT-TGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGT 106128 || | || |||||| | |||| ||||||| ||||| | | || | ||| | Sbjct 234433 TCCCACATGCCAAATGGTTTAGCGTTCC-ACATATCGAATTGTAAAATACCCTTGGAAGC 234491 Query 106129 GGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTC 106188 |||||||| ||||| || ||| ||||| || |||||||||||| || || Sbjct 234492 TGGAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTC 234551 Query 106189 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGA 106248 || | || || || || ||||| ||||| | || | | ||||| ||||| Sbjct 234552 AAGAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTCTGA 234611 Query 106249 ATCAAATGCGTAG-CGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 ||||| | |||| || ||| ||| | ||| || | ||| || ||||| | | ||| Sbjct 234612 TTCAAA-GGGTAGACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAA 234670 Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AACGGGATAAAAATTTCTGT 106364 ||||||| || |||||| || |||| || ||| ||| ||||| |||| | || Sbjct 234671 TAGGTCTATGCTTCATATTTGAATTTC---TAGCCTCGGGAACTGGATAGTAATTACGGT 234727 Query 106365 CAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT 106424 | || |||| ||| | || | ||||| | || | || || || | | | || ||| Sbjct 234728 CGATAACTCTGTTCAAGTTGTGGGTAATGACTTTAGCAATCTCGTGTAATCTCTCGAAAT 234787 Query 106425 CAAA------AGTGCGAGTCTCTT------CATTGACATACTTTGGAAGGGCGATTGATG 106472 | | ||| | |||| | | || | || ||||| || || | Sbjct 234788 TATAGCTTGCAGTTTTACCATCTTCTGAAACCTCAACGAATGCCGGTAGGGCAATAGAAG 234847 Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532 | ||||| ||||| || || |||||| | || || | ||||| ||| |||| Sbjct 234848 CTAAATTACAAACTGCAGTTTCATCCGGGGAGGAATATTCGACGATTTCACAACATAAGT 234907 Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592 | || || || || || || |||| |||||| |||| |||| || || ||||| | Sbjct 234908 TAGATGATTTGATAGTACCTAAGTTCTGTTGGTTTGTCTTCCTGTTACATGCGTCCTTAT 234967 Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTG-AGAATTGCCTTCCACACATCG 106651 | | |||| | || || || || || ||||||| |||| | ||| || | ||||| | Sbjct 234968 AAACCATGAAAGGTGTACCTGTTTCTGTCTGTG-CTTGCAAAATGGCATACCACAACTTT 235026 Query 106652 GCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCA 106711 ||| | ||| | || | || || || ||||| || || || ||||| Sbjct 235027 TGGGC---TTTAATTGTTTTACCACGACCTTCTCTTTCGTAACGAGTATATAGTTCTTCA 235083 Query 106712 AACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGAC-AGAAAAGAGACCA 106770 || || |||||| | | || | |||||| | | |||| | | || | || ||| Sbjct 235084 AATTCATCACCCCACACATCATCTAAACCTGG-GGCAGCACTGGGCGAAAATAAAGTCCA 235142 Query 106771 TTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAG 106830 | ||| |||| | ||| || ||||||||||| || || ||||| || | | || | Sbjct 235143 AGGCCCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAA 235202 Query 106831 ATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGAT 106890 |||||| ||| ||||| | ||| || | || | || | || || | ||| Sbjct 235203 ATCTCTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGAT 235262 Query 106891 ATCCGCGTGCCATGGCT-CAAGATA-----GACTGCGATAGATCCCTTTCGACGCCCAGC 106944 ||| || |||||||||| ||||| | || || || || ||| | ||| | Sbjct 235263 ATCTGCATGCCATGGCTCCAAGAAAAGGGCGAAGGCACCAGGTCTCTTGTTA---CCACC 235319 Query 106945 TTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGA 107004 || | ||||| || || || || || || |||| ||| ||||| | || | ||| Sbjct 235320 CTGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGA 235379 Query 107005 TTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCC 107064 ||| || || || ||| ||| ||| | | | | ||| || | || Sbjct 235380 AGTACCGTTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACC 235439 Query 107065 AATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTT 107124 || ||| || || || || || ||||| || | | ||| |||| ||||| | Sbjct 235440 AACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTC 235499 Query 107125 GATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACC 107184 ||| ||||| ||||| |||| || | ||| || ||||| || || ||| ||||| Sbjct 235500 GATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACC 235559 Query 107185 AGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATG 107243 ||| ||||| | ||||| | |||||| |||| || ||| |||||| | || | Sbjct 235560 AGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAA-GTATCTTAACGACATCAAATTATAAG 235618 Query 107244 TCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 ||| || ||||| || || || || ||||| || | ||||||||||| Sbjct 235619 TCTTCAGCACAGATTCGATATCGCTACCATGGATACCTAGCGCCACACGCAT 235670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978521199160