Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740795.1_202016-09-
21] 113 sequences; 11,971,645 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq9 91.5 1e-13
seq12 82.4 8e-11
>seq9
Length=419488
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| || | ||| ||||| || | || ||||||||||| |||||||| || |
Sbjct 61995 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 61936
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || |||||| | ||| ||||||||| |||||| | ||| || || || ||
Sbjct 61935 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 61876
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| ||||| ||| ||| || | | || | ||||| | | ||| |||
Sbjct 61875 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 61816
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 143175
|| | ||| | ||||| || ||||| || || || ||
Sbjct 61815 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 61778
>seq12
Length=1046242
Score = 82.4 bits (90), Expect = 8e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| || || || || ||||||||||| || || || |||||| || || |||||
Sbjct 60602 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 60661
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
||| |||||| | ||| ||||| ||||| || ||||| ||||| |||||| ||
Sbjct 60662 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 60721
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | || || | | ||| ||||| | || | || || |||||||| ||
Sbjct 60722 ACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 60781
Query 143168 TTTACGAATATTTGCATA 143185
|| ||||| || ||||||
Sbjct 60782 TTGACGAAAATCTGCATA 60799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507013683842160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |