Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740805.1_202016-09-
21] 249 sequences; 12,189,529 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq12 149 6e-31
seq11 105 6e-18
seq9 105 6e-18
>seq12
Length=1052274
Score = 149 bits (164), Expect = 6e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||||||||| || | ||| |||||||| |||||||| || | |
Sbjct 65136 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 65195
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||||| |||| || ||||||||||| ||||| ||||||| ||| || || | |||
Sbjct 65196 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGG 65255
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||||||| ||| || ||| | | | | ||||||| ||||| |||
Sbjct 65256 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 65315
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| |||||||| |||||||| || ||||| ||||||||
Sbjct 65316 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 65362
Score = 120 bits (132), Expect = 3e-22
Identities = 167/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || |||||||||||||| |||||| ||| || |||||||| ||||| | |
Sbjct 64908 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 64967
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| |||| |||| ||||| |||||||| ||||| ||||| | || || || | ||||
Sbjct 64968 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 65027
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGA-GTTG-CCACCGTGTCGCTCGATTCCA 35687
| | ||||||| | ||| |||| ||| || |||| | | |||||| ||||| |
Sbjct 65028 ATACCTTCCTTGT-CTTGA-ATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 65085
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| | || || || || || || | |||||| || || || |||||
Sbjct 65086 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 65134
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||| | ||| | |||||| || |||||| |||||||||||||| | |
Sbjct 65364 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 65423
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| |||| |||| || ||||||||||| ||||| ||||| | || || || | |||
Sbjct 65424 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 65483
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | ||||||| | ||| ||| | | | |||| | | || ||| ||||| ||
Sbjct 65484 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 65542
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| || || |||||||| |||||||| || || || ||||||||
Sbjct 65543 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 65590
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||||||||| || | ||| |||||||| |||||||| || | |
Sbjct 64680 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 64739
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||||| | || || || |||||||| ||||| ||||| | ||| || |||| |||
Sbjct 64740 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 64799
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGA-GTTG-CCACCGTGTCGCTCGATTCCA 35687
| | || ||| | ||| | || ||| || |||| | | |||||| ||||| |
Sbjct 64800 ATAC-CTTCTTTATCTTGA-ATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 64857
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| | || || || || || || | |||||| || || || |||||
Sbjct 64858 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 64906
Score = 89.7 bits (98), Expect = 5e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566
|| ||||| | |||||||| || | || | || |||||||||||| ||||| ||
Sbjct 64198 TTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCC 64257
Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626
| || |||| | || || || |||||||| ||||| ||||| | |||||||| | |
Sbjct 64258 GACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGA 64317
Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTC 35685
|||| | ||||||| | ||| ||| | | | |||| | | ||||| |||||
Sbjct 64318 GGAATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTC 64376
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| | || || || ||||| |||| || || || || || |||||
Sbjct 64377 AACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 64427
>seq11
Length=648730
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | ||| ||||| ||||||||||| || |||||||| |||||||| || |
Sbjct 619215 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 619274
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| |||| |||| |||| |||||||| ||||| ||||| | || ||||| | ||
Sbjct 619275 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 619334
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||||| |||||| ||| | | | | | ||||| ||||| ||
Sbjct 619335 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 619394
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727
|||| ||||| || ||||| |||||||| || || ||
Sbjct 619395 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 619432
>seq9
Length=440765
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||| || || || || || || |||||||||||||| || | |
Sbjct 68986 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 68927
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||||| |||| |||| |||||||| ||||| ||||| | || ||||| | ||
Sbjct 68926 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 68867
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||||| |||||| ||| | | | | | ||||| ||||| ||
Sbjct 68866 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 68807
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727
|||| ||||| || ||||| |||||||| || |||||
Sbjct 68806 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 68769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450792196904920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |