Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740895.1_202016-09- 21] 212 sequences; 11,991,999 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5 268 1e-66 >seq5 Length=560716 Score = 268 bits (296), Expect = 1e-66 Identities = 893/1372 (65%), Gaps = 42/1372 (3%) Strand=Plus/Minus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 ||||| || |||||||||| |||||| ||||| | ||||| || || |||||||||||| Sbjct 297793 GGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCC 297734 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCAG 106069 || || || | | | || ||| | | | |||| | || ||| || ||||| Sbjct 297733 ATGGTCAAGGAATTT--CTAATACCATGCTTCATGATATCTTTTCTTAAGGTG-TCCCAA 297677 Query 106070 TCGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTG 106129 || | || | || || |||||||||||||| || || | ||||| || | Sbjct 297676 TCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCA 297617 Query 106130 GGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC--AGCCAATTCACAGCTCGCCT 106187 ||||| || | || || || || | ||| | |||| ||| | |||||| || | Sbjct 297616 GGAGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGAGCTAGTTCACAAGAAGCTT 297559 Query 106188 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 106247 ||| ||| || ||||| || ||||||||||| | ||| | | |||||| || | Sbjct 297558 CCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAG 297499 Query 106248 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 ||||||||| | || ||| || || || ||||||||||||||||||||| ||| Sbjct 297498 AATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAA 297439 Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 106367 | ||||| |||| |||||| || |||| ||| ||||| || || |||| | |||| Sbjct 297438 TTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAA 297379 Query 106368 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAA 106427 |||||| ||||| ||| ||||||| || | |||||||| | ||||| | | Sbjct 297378 TGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGT 297319 Query 106428 AAGTGCGAGTCT---------------CTTCATTGACATACTTTGGAAGGGCGATTGATG 106472 | ||| ||||| |||| ||| || | ||| | ||| | || | Sbjct 297318 ATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC--TGGTAAGGCAACGGAAG 297262 Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532 |||| || |||||||| || ||||| | ||| ||| || | |||||| || |||| Sbjct 297261 CCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGT 297202 Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592 | || ||| || || || || ||||| ||| ||| |||| || |||||||||| Sbjct 297201 TTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGT 297142 Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGG 106652 | | | | | || || || || || || || | | | ||| | | ||| | || Sbjct 297141 AAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATA-ATTTT 297083 Query 106653 CGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAA 106712 || | | || | || | || || || |||||| || || || || |||| Sbjct 297082 TGG--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAA 297025 Query 106713 ACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTGGACAGAAAAGAGACCAT 106771 |||| ||||| ||| | ||| || || ||| |||| |||| | | ||| Sbjct 297024 ACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT-TGGAGAGAATAATGTCCAG 296966 Query 106772 TGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGA 106831 ||| || || || |||||||||||||| || |||||||| || | | || | | Sbjct 296965 GTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAA 296906 Query 106832 TCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA-CTCAAGGAACTCCATGAT 106890 ||||| ||| || || | ||| ||||| || ||| |||| || || | ||| Sbjct 296905 TCTCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAATATCAATAAAATCAAAGAT 296847 Query 106891 ATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTT 106946 ||| || |||||||| || || || | || | | || |||| | ||| | | Sbjct 296846 ATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTT-TATTACCACCCT 296788 Query 106947 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 107006 | | ||||| || || ||| || || || |||| ||| ||||| | ||| | || Sbjct 296787 GGTCAACATAACGGGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAG 296728 Query 107007 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 107066 ||| ||||| || ||| ||| | | | | | | |||||| || | |||| Sbjct 296727 TACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAA 296668 Query 107067 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 107126 |||| ||||| || || || ||||| ||| | | || | || || || | || Sbjct 296667 TACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGA 296608 Query 107127 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAG 107186 | ||||||||||| |||| | | ||| ||| |||||| || ||| |||| ||||| | Sbjct 296607 TAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGG 296548 Query 107187 CATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTC 107245 ||||||| | ||||| | |||||| | || ||| || | |||||| || || || Sbjct 296547 CATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAGAGACATCAAGTTATACGTT 296489 Query 107246 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297 || || ||| || || ||| ||||||||||| | || || | ||||| Sbjct 296488 TCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAA 296437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979236550880