Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740915.1_202016-09- 21] 392 sequences; 12,356,564 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5 244 9e-60 seq9 179 3e-40 seq10 170 2e-37 seq12 107 2e-18 seq11 82.4 7e-11 >seq5 Length=577931 Score = 244 bits (270), Expect = 9e-60 Identities = 417/600 (70%), Gaps = 6/600 (1%) Strand=Plus/Minus Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 ||| || || |||| |||||||| || ||||||||||| ||||| || | || || Sbjct 302151 TTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACG 302092 Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460 | |||||||| ||| |||||| | | ||| | ||| || || | || |||||||| Sbjct 302091 AATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCA 302032 Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520 || || ||||||| ||||||||| || ||||| ||||| || ||||| || || ||||| Sbjct 302031 TGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACG 301972 Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580 ||| ||||| ||| | || | | ||| || | | |||||| || | ||| | || Sbjct 301971 GGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACC 301912 Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 || | ||||| ||| |||| ||| || | || | ||| || || || | | Sbjct 301911 AGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGT 301852 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 ||| || |||| || |||| |||| |||||||| || |||||||| |||||| || Sbjct 301851 TTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTT 301792 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | || ||||||||||| || |||||||| | ||| || ||| |||| ||||| || Sbjct 301791 CATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGT 301732 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 || |||||| ||||| ||| ||||| | || ||||| || | || || || Sbjct 301731 TGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTC 301672 Query 23821 AATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879 || | |||| ||||| || || | ||||| | ||| || | | ||| || | ||| Sbjct 301671 GATAT-CTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGG 301613 Query 23880 C--CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937 | | ||| ||||| ||| | | | ||| ||||||| || |||||||| |||||||| Sbjct 301612 CCACTTGA--CCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATA 301555 >seq9 Length=446352 Score = 179 bits (198), Expect = 3e-40 Identities = 426/641 (66%), Gaps = 2/641 (0%) Strand=Plus/Plus Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 || ||| ||| |||| |||||||| || ||||||||||| ||||| || | || || Sbjct 238225 TTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCACG 238284 Query 23401 CACCTCCTCTTTGCC-GGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459 | || || || || ||||| ||| | | ||| | |||||| || | || ||||||| Sbjct 238285 AATTTCTTCCTTACCATGTGTT-TTTCTGATATCGACAAAGTCGAAGATATCTGCATGCC 238343 Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAAC 23519 | ||||| | | ||| ||| || || || |||||||| || || ||||| || || |||| Sbjct 238344 ATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCCACATAAC 238403 Query 23520 GGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGC 23579 |||| || || ||| | || | | ||| || | | ||||| || | ||| | Sbjct 238404 GGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTAC 238463 Query 23580 CCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCG 23639 | || | | |||||| | | || | ||||| | || | ||| | || || | | Sbjct 238464 CAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTGCAG 238523 Query 23640 ATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTT 23699 ||| || ||||| || |||| ||||| ||| || || || || ||||| ||| || | Sbjct 238524 TTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCATCCT 238583 Query 23700 TGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTG 23759 | | || | |||||||| ||||||||||| | | |||||| | || ||| | | Sbjct 238584 TCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGAATAAAG 238643 Query 23760 TCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCAT 23819 | ||| ||||| || ||||||| |||||| | ||| || || | | | | | Sbjct 238644 TTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCACAGATT 238703 Query 23820 CAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879 | || || || || ||||| | || || ||||| | || | ||||| | || Sbjct 238704 CGATATCGCTACCATGGATACCTAGCGCCACACGCATTACCAAATGCTGAGGACGTTCTG 238763 Query 23880 CCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGT 23939 || | ||||| | | | | || || ||||| | || || || ||||| ||||| Sbjct 238764 CCACTTCACCGTTCAGTCTTAGCAAGTACGAACGCTCCAGTGTCTTGAATCCGAAATACG 238823 Query 23940 CATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAA 23980 ||| | || || | ||||| ||| |||||||| |||||| Sbjct 238824 TATACTGGAAATCCCTATCGTACACGATGGCCGAGTTCAAA 238864 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 ||| || |||||| |||| || || || ||||| | || |||||| | || |||| | | Sbjct 68996 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 69055 Query 31261 CGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319 || | ||||| || ||| | | |||||||||| | || || ||||| || | Sbjct 69056 TGACAATGTCAAGTCAAAGATTCAAG-ACAAGGAAGGTATCCCACCTGACCAACAAAGAT 69114 Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379 | || || ||||| || || ||||||||| || || || || || |||||||||| Sbjct 69115 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAA 69174 Query 31380 AAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||| ||| | || | || | ||| |||| || |||| Sbjct 69175 AAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTA 69216 >seq10 Length=732466 Score = 170 bits (188), Expect = 2e-37 Identities = 547/836 (65%), Gaps = 21/836 (3%) Strand=Plus/Plus Query 57591 GCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGG 57650 || ||||| || || ||||||| |||||| | || ||||||||||| | || ||| Sbjct 387233 GCCGAAGCTTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGG 387292 Query 57651 GATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCC 57707 | | | || || |||||| ||| ||| || | || ||||||||| Sbjct 387293 AACAACAGAATGAACGAGAACGAGAGATTTTTCATTTCCAGAGTTCTTGCCTTTTTCGCC 387352 Query 57708 GCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTG 57767 || || || ||||||||||| || || ||||| |||| || || ||||| ||| | Sbjct 387353 GCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATT 387412 Query 57768 ACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827 | ||||| | | || ||||| || ||| | |||||||| | || || |||| Sbjct 387413 CCAGAGGCAAAGAGTTTCTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACT 387472 Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGAC-TGTTCAA 57886 || || | | |||||||| ||| | |||||| | || || | | | ||||||| Sbjct 387473 TACTCCTTGTTGATCGATACCTACATCAAGGACCCTAAAGA-AAGTGAATTCTTGTTCAA 387531 Query 57887 CGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAA 57946 || || | || || || | |||| ||||||| || ||| | | | |||||| | Sbjct 387532 TGCCATTCACACCATCCCAGAAATCGGTGAGAAGGCCGAATGGGCTTTAAGATGGATTCA 387591 Query 57947 AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATT 58006 | ||| ||| ||| | || || ||| | || || ||| || | |||||| | || Sbjct 387592 AGACGCTGACGCCTTGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTT 387651 Query 58007 CTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCT 58066 || || || |||||| | || || ||| |||| || | || |||||||||| | Sbjct 387652 TTTCTCCGGTTCCTTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTT 387711 Query 58067 GACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126 || ||| |||||| ||||| | | ||||| ||| | || || || ||||| ||| | Sbjct 387712 AACCTTTTCCAACGAATTGATCTGTAGAGACGAAGGTTTGCACACCGACTTTGCATGCTT 387771 Query 58127 AATGTACTCTCACATTGTCAATAAACC-GACGC-GGGATCGCATCTTG--GACATTATCA 58182 ||| | | || | || ||||| ||| | | |||| ||| | ||| ||| Sbjct 387772 GTTGTTCGCCCATTTGAAGAACAAACCAGACCCAGCCATCG----TTGAAAAAATTGTCA 387827 Query 58183 CCGAGGCGGTCGCGATCGAA-AATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTC 58241 ||||||| || | || ||| || || | || || ||| |||| || || |||| Sbjct 387828 CCGAGGCTGTGGAAATTGAACAAAGA-TACTTCTTGGACGCCTTACCAGTTGCTTTGCTA 387886 Query 58242 GGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTC 58301 ||||||||| ||| || ||| | ||| ||||||| || ||||||||||| ||| || Sbjct 387887 GGTATGAACGCTGACTTAATGAACCAATACGTTGAGTTCGTCGCCGACAGACTGTTGGTC 387946 Query 58302 GAACTGATTGGAGAGCGTCATTACAACACG---AAAAATCCGTTTGATTTTATGAATCTG 58358 | || | || | | ||| ||| | |||| || || ||||| ||| | Sbjct 387947 G--CT-TTCGGTAACAAGAAATACTACAAGGTCGAAAACCCCTTCGATTTCATGGAAAAC 388003 Query 58359 ATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414 ||||| | | || ||||| ||||| |||||||| | |||| || || ||||| Sbjct 388004 ATCTCCTTGGCCGGTAAGACTAACTTCTTCGAAAAGAGAGTTTCTGACTACCAAAA 388059 >seq12 Length=1045271 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||| |||| || ||||| ||||| | || |||||| | ||| Sbjct 60374 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 60315 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || ||| |||||||||||| | || || || || Sbjct 60314 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 60255 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || || || || ||| | |||||| || || || || || ||| Sbjct 60254 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 60195 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| ||||| |||||||| |||| | ||| |||| || |||| Sbjct 60194 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGTA 60146 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || |||||||||||||| |||||| | || || || || || ||| | || |||||| | Sbjct 491190 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 491249 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| | | || | ||||| | || ||||||||||| | || || ||| Sbjct 491250 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 491309 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || || | | || || ||||| || || |||||||| || ||| || ||| || Sbjct 491310 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 491369 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||| ||||| ||||| ||||| || |||| | ||| |||| || ||| Sbjct 491370 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGT 491420 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| |||||||| || || || ||| | || |||||| | || Sbjct 60146 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 60087 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | || || || ||| ||||||||||| | || || |||||| Sbjct 60086 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 60027 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || || || || || | ||||| || || || || || || Sbjct 60026 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 59967 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||| || || |||||||| || || | || ||||||| |||| Sbjct 59966 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTA 59918 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||| |||| || ||||| || || | || |||||| | ||| Sbjct 60602 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 60543 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || || ||| ||||||||||| | || || || || Sbjct 60542 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 60483 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || || || || ||| | |||||| || || || ||||| ||| Sbjct 60482 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 60423 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || || | ||||| || || || || || || |||| Sbjct 60422 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTA 60374 >seq11 Length=653221 Score = 82.4 bits (90), Expect = 7e-11 Identities = 150/220 (68%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| |||||| |||| || || || ||||| | || |||||| | || |||| | Sbjct 622401 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 622342 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | ||||| | || ||||||||||| | || || ||||| || | | Sbjct 622341 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 622282 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || || ||||| || || ||||||||| || ||| | || || ||||| ||||| Sbjct 622281 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 622222 Query 31382 GAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||| | ||| |||| | ||| | || || |||| Sbjct 622221 GAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGTA 622182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445764215744640