Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740925.1_202016-09-
21] 373 sequences; 12,363,645 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq12 116 9e-21
seq11 100 7e-16
>seq12
Length=1056676
Score = 116 bits (128), Expect = 9e-21
Identities = 153/211 (73%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || |||||||| || |||||||||||||| |||| |||||||| |||||||| |
Sbjct 496453 CAAG-TGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCA 496395
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || || ||||| | || || ||||| | | || |||||||| ||||| |
Sbjct 496394 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGA 496335
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | |||| ||| || ||||| || |||||||| || |
Sbjct 496334 TCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTAC 496275
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || | |||||| ||||| | ||||| ||
Sbjct 496274 CGGTTAAAGTCTTGACGAAAATTTGCATCTT 496244
Score = 114 bits (126), Expect = 3e-20
Identities = 151/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||||||||| || |||||||||||||| || | || ||||| ||||||||||
Sbjct 64511 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTA 64569
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || || || | ||||| || |||| | ||| ||||| || |||||||
Sbjct 64570 GTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAA 64629
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | |||| ||| || || || || || ||||| || |
Sbjct 64630 TCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCC 64689
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || ||||| || ||||| | |||||
Sbjct 64690 CTGTTAGAGTTTTGACGAAAATTTGCAT 64717
Score = 111 bits (122), Expect = 4e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| || || || |||||||| | || ||||| || || ||||||||||| | | |||
Sbjct 65049 CTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTT 65108
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || |||||||| || ||||| ||||| | || || || || | | ||| |||
Sbjct 65109 CTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCT 65168
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| ||||||||||| |||||| | || | |||| ||| || || || ||
Sbjct 65169 TCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGG 65228
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || || || ||||| || ||||| | |||||
Sbjct 65229 GTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 65269
Score = 111 bits (122), Expect = 4e-19
Identities = 150/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||||||||| || |||||||||||||| || | || ||||| || |||||||
Sbjct 65548 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTA 65606
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||| ||||| | |||||| || || | | ||| |||||||| || || |
Sbjct 65607 GCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGA 65666
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
|||| || || | || | |||| || || || || | ||| || ||||| |
Sbjct 65667 TTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTAC 65726
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || | |||||| || |||| ||||||
Sbjct 65727 CGGTCAAAGTCTTAACAAAGATCTGCAT 65754
Score = 105 bits (116), Expect = 2e-17
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| || || || |||||||| | || ||||| || || ||||||||||| | | |||
Sbjct 65762 CTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTT 65821
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || |||||||| || ||||| ||||| | || || || || | | ||| |||
Sbjct 65822 CTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCT 65881
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| ||||||||||| || || | || | | | || ||| || ||||| |
Sbjct 65882 TCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAAT 65941
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || || | |||||| ||||| | ||||||
Sbjct 65942 GTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 65982
Score = 104 bits (114), Expect = 5e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954
|||||| |||||||| ||||| ||||| || ||||| || | | ||||| ||||||||
Sbjct 64280 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 64339
Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
||| || ||||| || || | || |||||||| | | || |||||||| |||||
Sbjct 64340 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 64399
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|||||| || || | || | |||| ||| || || || || || ||||| ||
Sbjct 64400 AATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTT 64459
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || || | |||||
Sbjct 64460 ACCTGTCAGTGTCTTGACAAAAATTTGCAT 64489
Score = 95.1 bits (104), Expect = 3e-14
Identities = 96/124 (77%), Gaps = 1/124 (1%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||||||||| || |||||||||||||| || | || ||||| || |||||||
Sbjct 65291 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTA 65349
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||| ||||| | |||||| || || | | ||| |||||||| || || |
Sbjct 65350 GCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGA 65409
Query 152017 TTTT 152020
||||
Sbjct 65410 TTTT 65413
Score = 89.7 bits (98), Expect = 1e-12
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967
||||||||||| || ||||| ||||| | | ||||| || ||||| || || |||
Sbjct 64749 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 64808
Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027
|| || || | || || || || | | || |||||||| ||||||||||| ||||
Sbjct 64809 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTG 64868
Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087
|| | || | |||| ||| || || || || || ||||| || || || |||||
Sbjct 64869 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 64928
Query 152088 TTCACGAAGACCTGCAT 152104
|| ||||| | |||||
Sbjct 64929 TTGACGAAAATTTGCAT 64945
>seq11
Length=667938
Score = 100 bits (110), Expect = 7e-16
Identities = 147/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| | ||| | ||| | ||| || || |||||||||||||| || | || |||||| ||
Sbjct 619333 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 619392
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
||||| | || || || ||||| | || || ||||| | | ||| ||||||||
Sbjct 619393 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 619452
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
||||| || || |||||| | || | | |||| ||| || ||||| | ||| ||
Sbjct 619453 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 619512
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
|| || || || | |||||| ||||||
Sbjct 619513 GGTCTTACCAGTCAAAGTCTTAACGAAG 619540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153815285818283
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |