Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741015.1_202016-09- 21] 217 sequences; 12,141,818 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq13 140 4e-28 >seq13 Length=895424 Score = 140 bits (154), Expect = 4e-28 Identities = 336/504 (67%), Gaps = 12/504 (2%) Strand=Plus/Plus Query 159277 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 159336 || ||||| || ||| ||| || |||||||| || |||| | || ||||| ||| | Sbjct 616877 ATTACAGGTTTCGATGGTATTTCTTTACAACCAAATTCAGGTGCTCAAGGTGAATATACT 616936 Query 159337 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 159396 || ||| || |||| | | |||| || | ||| || || | | || || ||| Sbjct 616937 GGTCTGAGAGTAATCAGATCCTACCTGGAAAGCAAAGGTGAAAATCATCGTAACGTGTGT 616996 Query 159397 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAA 159456 || || || | || || ||||| || ||||| || || || | ||||| || | ||| Sbjct 616997 TTAATCCCTGTATCCGCTCATGGTACAAATCCGGCTTCTGCCGCTATGGCGGGTTTAAAA 617056 Query 159457 GTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAA 159516 ||||| |||||| ||| | |||||| |||| | || || |||| || Sbjct 617057 GTTGTTCCTGTCAACTGTTTGCAGGATGGCTCATTAGATCTGGTTGACTTAAAGAATAAG 617116 Query 159517 GCAATCATGAATA-CATTTGAA----CTGTCATGTATTATGATTACATATCCATCTACAC 159571 || |||| | |||| ||| || | | ||||| || ||||| || || Sbjct 617117 GC-----TGAACAACATTCGAAAGAACTAGCCGCCGTAATGATCACCTATCCTTCCACTT 617171 Query 159572 ATGGTGTATTTGAAACAAACATCAGACA-GATATGTAAGATTGTTCATGAGAATGGTGGT 159630 | ||| |||||||| || |||| ||| | ||| | | || || ||| |||||| Sbjct 617172 ACGGTTTATTTGAACCAGGCATCCAACATGCTAT-TGATATCGTACATTCTTTTGGTGGA 617230 Query 159631 CAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGAC 159690 || || ||| | |||||||| ||| | ||||| ||||| || ||| | ||| | || Sbjct 617231 CAAGTCTATTTGGATGGTGCTAATATGAATGCGCAGGTTGGGCTAACTTCACCCGGAGAT 617290 Query 159691 TATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGT 159750 |||||||||||| || || | || |||||||||||||| | ||||| ||||| ||| Sbjct 617291 CTTGGTGCAGATGTTTGCCACTTGAATTTACATAAGACATTTTCCATTCCTCATGGTGGT 617350 Query 159751 GGAGGTCCTGGCGTAGGTCCTATT 159774 || ||||| | | || ||| ||| Sbjct 617351 GGTGGTCCAGCTGGAGCTCCCATT 617374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588049604911120