Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741015.1_202016-09-
21] 217 sequences; 12,141,818 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq5 181 3e-40
seq9 143 8e-29
seq13 131 5e-25
seq4 102 2e-16
seq15 84.2 6e-11
>seq5
Length=560191
Score = 181 bits (200), Expect = 3e-40
Identities = 482/732 (66%), Gaps = 12/732 (2%)
Strand=Plus/Minus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
|||||| ||||| |||||||| | ||| || ||||||| ||||| || || || ||
Sbjct 298020 GTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATT 297961
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
|||||| |||||||||||||||||||| | || | | || || || || || | || ||
Sbjct 297960 AGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGC 297901
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG--CCTTCC 155807
|||| ||| ||| | | |||| |||| | || || | |||||
Sbjct 297900 TTCCAAAATGGAATACCATAATTTTTGGGC-----TTTGATAGTCTTACCACGACCTTCT 297846
Query 155808 GACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG- 155866
||| || |||| || | | || |||||||||||||| || | |||||
Sbjct 297845 TTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGA 297786
Query 155867 GCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATAC 155926
|| | | || | | || | | ||| | ||| | ||||||| ||| || |
Sbjct 297785 GCTGATGTTGGAG-AGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAG 297727
Query 155927 ATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATT 155986
|||| ||| | |||| ||| | || ||||| ||||| | ||||| ||
Sbjct 297726 ATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT 297667
Query 155987 CTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAA 156046
||||| | || | || || ||||||| ||| ||| ||||| || | |||||
Sbjct 297666 CTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAA 297607
Query 156047 ACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACC 156103
|||| || || |||||||| || ||||| || ||||| |||||||| ||||
Sbjct 297606 CGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACG 297547
Query 156104 TAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGA 156163
| ||||||||| | ||| || ||||| || || || || ||| | ||||||| |||
Sbjct 297546 AATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGA 297487
Query 156164 GCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTC 156223
|||| ||||| |||||||| ||||||||||| | ||| ||||| ||| |||||
Sbjct 297486 ACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTC 297427
Query 156224 CTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGA 156283
||| | || | | |||| || || ||||| || || | ||| | | | | || ||
Sbjct 297426 CTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGA 297367
Query 156284 ACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA 156343
| ||||||| ||| || || || ||||| | || || | || ||| |||||||
Sbjct 297366 GGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATA 297307
Query 156344 CTTATTAGACAT 156355
|| ||||||
Sbjct 297306 TTTTAGAGACAT 297295
>seq9
Length=444766
Score = 143 bits (158), Expect = 8e-29
Identities = 208/290 (72%), Gaps = 3/290 (1%)
Strand=Plus/Plus
Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
|| |||||||| || ||||| || ||||| |||||||| |||| | ||||||||| |
Sbjct 242812 TTACCACCCTGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAAC 242871
Query 156120 CCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTATGAAT 156178
|| || ||||| || ||||| || |||| ||| ||||| | || || | || | ||
Sbjct 242872 CCGTTTGAAGTACCGTTGGTACCAGCGA-TATAAGAACCTGTGGAACGGATGTTGTTGAT 242930
Query 156179 ATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAA 156238
||| || |||| |||||||| ||| ||||| ||| ||||| || | ||||| |
Sbjct 242931 ATGAAGACCAACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATA 242990
Query 156239 AATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCG 156298
||||||||| ||||| ||||| | ||| | | || | || ||| | |||||| |
Sbjct 242991 AATACCTTCGATAGAGTCATCCTTCATGGCAACTAAGAAACATGAAGACATTTGAGGATG 243050
Query 156299 TGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA-CTTA 156347
||| || ||||||||||||| || || | || ||| | || || ||||
Sbjct 243051 TGGCGTACCAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTA 243100
>seq13
Length=895424
Score = 131 bits (144), Expect = 5e-25
Identities = 256/378 (68%), Gaps = 3/378 (1%)
Strand=Plus/Plus
Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908
||| ||||| ||||||| | ||||||| || | ||||||| ||| || || |
Sbjct 421142 CCTGTCAAATCTACCAGGCCTTAATAATGCTTTATCGAGAATATCGGGTCTATTGGTACC 421201
Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968
|| || ||||||| || | | | | || |||||||| | ||| ||||||||
Sbjct 421202 AGCTAAAACAACAACGTGGTCAGCTGGAGTGAAACCATCCATTTCTACTAACATTTGATT 421261
Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028
|| || | || || |||||||| | |||| ||| |||| | || ||||
Sbjct 421262 TAGCGTGTTCTCTCTCTCATCATTGGCACCTGAAAAATTACCCTTTTGTCTTGCTTTT-- 421319
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
|| | |||||||||||||||||| || | | | || | ||||| ||| ||| ||
Sbjct 421320 -CCTATAGCATCAATTTCGTCAATAAACACAATCGAGGGTGCATTTTCTCTTGCAGTTTT 421378
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
|| || |||||||| | | ||| |||| ||||||| |||||||||||||||| ||| |
Sbjct 421379 GAACAAATCTCTTACTCTTGCTGCACCAACACCAACAAACATTTCTACAAATTCTGAACC 421438
Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
|| || | || | ||| ||||| |||||| |||| | || || | || ||
Sbjct 421439 AGAAACAAAATAAAACGGAACACCGGCTTCACCTGCTGTTGCCTTTGCAAGCAAAGTTTT 421498
Query 289209 ACCTGTTCCAGGTGGTCC 289226
||| || || ||||| ||
Sbjct 421499 ACCGGTACCTGGTGGACC 421516
>seq4
Length=1494852
Score = 102 bits (112), Expect = 2e-16
Identities = 135/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
|||||| ||| |||| ||| || ||| || ||||| | | || | |||||||||
Sbjct 213343 TTTCTTGTGGTGTTATCGTAATGAACCATGATATCTTCTAGAGCTTTCACTAAACGACGT 213402
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
||||||||||| ||| | |||||| || || ||||| || ||||| |||||||||||
Sbjct 213403 TGAATATAACCTGTTTCGGCTGTTTTGACGGCGGTATCGATAAGACCTTCACGACCACCC 213462
Query 302659 ATAGCATGGAAGAATAGCTCT--TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGA 302716
|| |||||||| || | ||| | |||| | || | ||| | | ||| ||||||| |
Sbjct 213463 ATTGCATGGAAAAAAAATTCTTGTGGGGTC-AAACCTCTCAA-ATATGAGTTCTCAACAA 213520
Query 302717 AACC 302720
||||
Sbjct 213521 AACC 213524
>seq15
Length=1059005
Score = 84.2 bits (92), Expect = 6e-11
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
||||| | |||||||||| ||||||||||| || || || || | || || |
Sbjct 597644 TGGGCAACAGTCATACGAGATGGAATAGCATGAGGGTTAATAATCAAATCTGGAACAATA 597703
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957
|| || || || || |||||||| || || | ||| || | |||||||| ||||||||
Sbjct 597704 CCTTCTGCGGTAAATGGCATATC-TTCTCTACGATATGTGATACCAATAGTACCCTTTTG 597762
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
|||||||||||| || || ||||||||
Sbjct 597763 ACCGTGACGAGAAGCAAATTTGTCACCAAT 597792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471813507887129
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |