Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741025.1_202016-09- 21] 257 sequences; 12,117,445 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5 163 3e-35 >seq5 Length=558014 Score = 163 bits (180), Expect = 3e-35 Identities = 786/1240 (63%), Gaps = 25/1240 (2%) Strand=Plus/Minus Query 109918 TCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTAC 109977 ||||||||||| || |||| ||| | || ||||||||| || | |||| | ||||| Sbjct 293529 TCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTAT 293470 Query 109978 GACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCA 110037 | || || || || | || | ||||| || | | |||||||| ||||| ||| Sbjct 293469 GGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCA 293410 Query 110038 AAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATA 110097 || || || ||| | | || | || ||| | || || || | || | || || Sbjct 293409 AAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATG 293350 Query 110098 AACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGT 110157 || || || ||||| |||||||| | | |||| || | ||| |||| || || | Sbjct 293349 AAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTT 293290 Query 110158 CGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACA 110217 | || ||| || ||||| | || || || ||||| | || | ||| || ||| Sbjct 293289 CTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACA 293230 Query 110218 GTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCT------CCTTA--- 110268 || | |||||||| | ||| | | | | | | || |||| ||| | Sbjct 293229 ACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAA 293170 Query 110269 -TTGACATATTTG--GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTG 110325 || || || || | |||| || || | || || |||| ||| || ||| Sbjct 293169 GTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGA 293110 Query 110326 TCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTC 110385 | | |||||| | |||||| || ||||| || ||| |||||||| ||||| || Sbjct 293109 GCTGAGTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTT 293050 Query 110386 TGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTC 110445 ||||| ||||| ||| || |||||||| || | | | | || ||||||||||| || Sbjct 293049 TGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTT 292990 Query 110446 TGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCT 110505 || | | | ||||| | ||||| | ||| || ||| ||| | ||||| Sbjct 292989 TGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGATAGTC---TTACCACGACCT 292933 Query 110506 TCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCC 110565 || | |||||| ||| || | ||||||| || | ||||| ||| | ||| Sbjct 292932 TCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCA 292873 Query 110566 TTCGCCT-TGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAA 110624 || ||| || | |||| | | ||| | ||| || || || | ||||||||| Sbjct 292872 GGAGCTGATGTTGG-AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAA 292814 Query 110625 CAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTG 110684 || ||||||||||| | || | ||| | || | |||| || || | ||| || Sbjct 292813 AAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTG 292754 Query 110685 GTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGC 110744 ||| | | || | ||| || | |||||| | ||||||||||| || || | || Sbjct 292753 GTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTAAAGGGC 292694 Query 110745 GATGGATCC----CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGA 110800 | | || ||| | ||| |||||| |||||| || || ||| |||||| | Sbjct 292693 AAACGCACCAGGTCTT-TTATTACCACCCTGGTCAACATAACGGGCGGTGTTATTGAAAA 292635 Query 110801 CCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTAT 110860 | | | ||||||||| | || | || ||| |||||||| ||| || | Sbjct 292634 CACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAG 292575 Query 110861 TGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC 110920 | | |||||||| |||||||| | |||||||||||| || || ||| |||| Sbjct 292574 TTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCAC 292515 Query 110921 ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGC 110980 | || | | || | ||||| || || || || || |||| |||||| | || | Sbjct 292514 ATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAAC 292455 Query 110981 AAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGA 111040 |||| ||||| ||||| || || || |||||||| | || || | || ||| | | Sbjct 292454 AAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-A 292396 Query 111041 ACAGACCTT-GGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGA 111099 | | | || | |||||| ||| || || || | || | | |||| ||||||| Sbjct 292395 AAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGG 292336 Query 111100 ATACCAATGGCAACTCGCATGAACATATATTGAGG-CGTT 111138 || || | || |||| ||| | | || ||| || |||| Sbjct 292335 ATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTT 292296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974107914600