Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741035.1_202016-09- 21] 432 sequences; 12,419,433 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq12 120 7e-22 seq356 111 4e-19 seq11 100 7e-16 >seq12 Length=1059860 Score = 120 bits (132), Expect = 7e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || |||||||||||||| || | || ||||| |||||||||| Sbjct 59194 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTA 59252 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || || || | ||||| || |||| | ||| ||||| || ||||||| Sbjct 59253 GTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAA 59312 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| |||||| | || | |||| ||| || || || || || ||||| || | Sbjct 59313 TTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCC 59372 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || ||||| || ||||| | ||||| Sbjct 59373 CTGTTAGAGTTTTGACGAAAATTTGCAT 59400 Score = 116 bits (128), Expect = 9e-21 Identities = 153/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || |||||||| || |||||||||||||| |||| |||||||| |||||||| | Sbjct 491600 CAAG-TGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCA 491542 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | || || ||||| | | || |||||||| ||||| | Sbjct 491541 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGA 491482 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | |||| ||| || ||||| || |||||||| || | Sbjct 491481 TCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTAC 491422 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || | |||||| ||||| | ||||| || Sbjct 491421 CGGTTAAAGTCTTGACGAAAATTTGCATCTT 491391 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || |||||||||||||| || | || ||||| || ||||||| Sbjct 59650 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTA 59708 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| ||||| | |||||| || || | | ||| |||||||| || || | Sbjct 59709 GCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGA 59768 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || || | || | |||| || || || || | ||| || ||||| | Sbjct 59769 TTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTAC 59828 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| || |||| |||||| Sbjct 59829 CGGTCAAAGTCTTAACAAAGATCTGCAT 59856 Score = 105 bits (116), Expect = 2e-17 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || || || || |||||||| | || ||||| || || ||||||||||| | | ||| Sbjct 59864 CTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTT 59923 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || |||||||| || ||||| ||||| | || || || || | | ||| ||| Sbjct 59924 CTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCT 59983 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| ||||||||||| || || | || | | | || ||| || ||||| | Sbjct 59984 TCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAAT 60043 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || | |||||| ||||| | |||||| Sbjct 60044 GTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 60084 Score = 104 bits (114), Expect = 5e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 |||||| |||||||| ||||| ||||| || ||||| || | | ||||| |||||||| Sbjct 58714 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 58773 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||| || ||||| || || | || |||||||| | | || |||||||| ||||| Sbjct 58774 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 58833 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 |||||| || || | || | |||| ||| || || || || || ||||| || Sbjct 58834 AATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTT 58893 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || | ||||| Sbjct 58894 ACCTGTCAGTGTCTTGACAAAAATTTGCAT 58923 Score = 86.0 bits (94), Expect = 1e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 ||||||||||| || ||||| ||||| | | ||||| || ||||| || || ||| Sbjct 59432 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 59491 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || ||||| | || || || || | | ||| |||||||| ||||||||||| || Sbjct 59492 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 59551 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || | || | | | || ||| || || || || || ||||| || || || || ||| Sbjct 59552 ACGTTGTCGATGGTATCGGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTC 59611 Query 152088 TTCACGAAGACCTGCAT 152104 || || || | ||||| Sbjct 59612 TTGACAAAAATTTGCAT 59628 >seq356 Length=443 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || |||||||||||||| || | || ||||| || ||||||| Sbjct 189 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTA 247 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| ||||| | |||||| || || | | ||| |||||||| || || | Sbjct 248 GCTACTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGA 307 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || || | || | |||| || || || || | ||| || ||||| | Sbjct 308 TTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTAC 367 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| || |||| |||||| Sbjct 368 CGGTCAAAGTCTTAACAAAGATCTGCAT 395 >seq11 Length=670749 Score = 100 bits (110), Expect = 7e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||| | ||| | ||| || || |||||||||||||| || | || |||||| || Sbjct 621649 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 621708 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||||| | || || || ||||| | || || ||||| | | ||| |||||||| Sbjct 621709 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 621768 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| || || |||||| | || | | |||| ||| || ||||| | ||| || Sbjct 621769 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 621828 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 || || || || | |||||| |||||| Sbjct 621829 GGTCTTACCAGTCAAAGTCTTAACGAAG 621856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153814413601872