Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741135.1_202016-09-
21] 378 sequences; 12,395,708 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq5 123 1e-23
seq9 93.3 2e-14
>seq5
Length=564765
Score = 123 bits (136), Expect = 1e-23
Identities = 311/473 (66%), Gaps = 0/473 (0%)
Strand=Plus/Minus
Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949
||||| ||||||| ||| |||||| || || || ||| || | ||| ||||
Sbjct 300007 TTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAA 299948
Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009
|||| | ||| || |||||||| || | ||||| ||||| ||||| ||||| | |
Sbjct 299947 TCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAA 299888
Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069
||| | |||||||| ||||| | ||||||||||| | || | ||||| |||
Sbjct 299887 TATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAG 299828
Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129
|||||| ||||| || || || || | ||||| | ||||||||| | ||| |
Sbjct 299827 GTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAG 299768
Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATAT 26189
||| ||| || | ||| |||||||| | | ||| | || || || || | ||| |
Sbjct 299767 GAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGT 299708
Query 26190 CGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTG 26249
|| ||| | ||| || |||||||| ||| ||||| ||||| || | |
Sbjct 299707 TATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGG 299648
Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309
| ||| |||| || | || || | ||||| | | || |||||||| || | ||
Sbjct 299647 TGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTT 299588
Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362
| | | | || || | ||| || || || || | || |||||| |||||
Sbjct 299587 GAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATAT 299535
Score = 89.7 bits (98), Expect = 3e-13
Identities = 317/492 (64%), Gaps = 14/492 (3%)
Strand=Plus/Minus
Query 24695 GTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGAT 24754
||||| | ||| ||||| || || |||||| ||||||||| |||||||||||||| |
Sbjct 301181 GTTCTCAAATAGTACATACCGGTCTTCAATCCCTTCTTCCATCCGTAAAAATGCATACTT 301122
Query 24755 GTTAGTTTTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGG-CAA-- 24811
|||||||| | || ||| | ||| ||||| |||| || |||| ||| |||
Sbjct 301121 GTTAGTTTACCCATAGTTGGGGCACGTAAGAACAAATTCAAAGAATGAGATTGATCAATA 301062
Query 24812 ---ACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAA 24868
||| |||| ||| || || | || |||||| || || || || || ||
Sbjct 301061 TAGACAGAACG------ATCGGCTGCCATGTTAATGATAGTCTTTTGTGAAATTTCCCAA 301008
Query 24869 GCTGTTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCA 24928
| || |||||| || || | || ||||| | ||| | ||||| || |||
Sbjct 301007 ACAGTCTTGTATAAGTCCTTCAATTCTTGTGGAACATTTGGTAAGCCTTGAATGGAGCCA 300948
Query 24929 TTTTCTCTCAATAGATTCAATCTCATATTCGGTGTCCAAAGAT-TAATTTTTTCAAGATC 24987
|||| | | | |||| | | ||||| | ||||| | ||| | |||| ||
Sbjct 300947 TTTTGTGTAATCAGATACTGTTTCATACCCTCATCCCAAATACCTAAATCAACCAAG-TC 300889
Query 24988 TCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAA 25047
| | |||| || | | ||||| || || || || | | | |
Sbjct 300888 ACGCAGTAAGTAAGGGTTCACAACCTGGAATTCACCGGATAAGACACGACGGGAGTACAT 300829
Query 25048 GTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGT 25107
|| ||||||| |||||| ||||||||||||| || || ||||| || || ||||| ||
Sbjct 300828 ATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGATGCAGT 300769
Query 25108 TGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167
|||||| ||| || | |||||||| | ||||| || | || |||| | ||||
Sbjct 300768 AGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATCTTTTCTTAA 300709
Query 25168 TTTATCCCAATC 25179
| ||||||||
Sbjct 300708 GGTGTCCCAATC 300697
>seq9
Length=445890
Score = 93.3 bits (102), Expect = 2e-14
Identities = 162/229 (71%), Gaps = 10/229 (4%)
Strand=Plus/Plus
Query 25048 GTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGT 25107
|||||| || | |||||| ||||||||||||| || | ||||| ||||| || || ||
Sbjct 238962 GTTTGAGGTCACTGGTTCGAAACATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGT 239021
Query 25108 TGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167
||||||| ||| || | || ||||| || |||| ||||||||| || | | ||||
Sbjct 239022 TGGCATTGGTGCCATAGTCAAAGAGTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAA 239081
Query 25168 TTTATCCCAATCTAAATTATTATCTAACTCG-ATATCGTTATCATATAAATCAAATTGTA 25226
| |||||||| | | | || | | || |||| || || ||| |||||||
Sbjct 239082 GGTTTCCCAATCCCACAT----GCCAAATGGTTTAGCGTT-CCACAT--ATCGAATTGTA 239134
Query 25227 ACAATCCACTT-GCTGCAGGCGATTGATCAAAAGTTGAATATTTACCTT 25274
| ||| | ||| | || || || |||||||| |||||||||||||
Sbjct 239135 A-AATACCCTTGGAAGCTGGAGAACCTTCAAAAGTAGAATATTTACCTT 239182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253038834276350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |