Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741165.1_202016-09-
21] 263 sequences; 12,213,375 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq12 141 7e-29
seq9 118 8e-22
seq11 105 5e-18
seq35 82.4 5e-11
>seq12
Length=1049627
Score = 141 bits (156), Expect = 7e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || || ||||| | ||||| ||||| || ||||| |||||
Sbjct 60563 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 60622
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| |||| ||||||| | ||| || || || | ||||| | ||||| || |||
Sbjct 60623 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 60682
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| |||||| ||||| || | || ||||| ||| | ||| ||
Sbjct 60683 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 60742
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|||| ||| || || || ||||| |||||||| || ||||||||||||
Sbjct 60743 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 60790
Score = 134 bits (148), Expect = 1e-26
Identities = 169/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || || || ||||| ||||| || ||||| |||||||| || |
Sbjct 60335 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA--G 60392
Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || |||| | ||||||| ||| || ||||| | ||||| | |||||| || |
Sbjct 60393 ACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAG 60452
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || ||||| || || ||| || ||||| || | || ||||| ||| | ||| |
Sbjct 60453 GGATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 60512
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| |||| ||| || || || ||||| |||||||| || ||||||||||||
Sbjct 60513 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 60562
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || || || || || ||||| || ||||| |||||||| |||
Sbjct 493578 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 493519
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| | ||||| ||||| || ||||| | ||||| | |||||||| ||||
Sbjct 493518 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 493459
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| || ||| || ||| | || ||||| || | ||| ||
Sbjct 493458 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 493399
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| | |||||| || ||||| || | ||| || || ||||||||||| ||
Sbjct 493398 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 493349
Score = 116 bits (128), Expect = 3e-21
Identities = 165/230 (72%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || || || ||||| ||||| || ||||| |||||||| || |
Sbjct 60791 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA--G 60848
Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || |||| ||||||||| || || || || | ||||| | |||||| || |
Sbjct 60849 ACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAG 60908
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || ||||||||||| ||||| || || | || || || ||| ||| |
Sbjct 60909 GGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAA 60968
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| ||||| || ||||||||||| |||| ||| || ||||| || ||||||
Sbjct 60969 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCATA 61018
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| | ||| || || || | ||||| || || || ||||| || ||||| ||
Sbjct 60107 CCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 60166
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| |||| | ||||||| ||| || || || | ||||| | || ||||| |||
Sbjct 60167 AGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGA 60226
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| |||||| || || | || ||||| || | ||| ||
Sbjct 60227 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 60286
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|||| ||| || || ||||||||||| || || |||||||||||||||
Sbjct 60287 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 60334
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| | |||| || | ||| | ||| || || || || |||||||||||
Sbjct 61019 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 61078
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| |||| ||||||||| || || || || | ||||| | ||||| || ||
Sbjct 61079 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 61138
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| |||||| || || | || || |||||| | ||| ||
Sbjct 61139 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 61198
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || ||||||||||| |||| ||| || || ||||| ||||||
Sbjct 61199 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 61246
>seq9
Length=441606
Score = 118 bits (130), Expect = 8e-22
Identities = 160/221 (72%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || ||||| || | || || |||||||| |||||||| || |
Sbjct 72352 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA--G 72295
Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || |||| ||||||| ||||| || ||||| | ||||| | |||||||| ||
Sbjct 72294 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 72235
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || ||||||||||| ||| || || ||| | || ||||| || | ||| |
Sbjct 72234 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 72175
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15168
| || || || ||||| ||||| |||| ||| || ||||||
Sbjct 72174 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 72134
Score = 82.4 bits (90), Expect = 5e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 15014 TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTC 15073
|||| ||||||| ||||| || ||||| | ||||| | |||||||| ||| || |
Sbjct 72039 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATAC 71980
Query 15074 CTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTA 15133
|||||||||| ||| || || ||| | || ||||| || | ||| || || |
Sbjct 71979 CTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 71920
Query 15134 AGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15168
| || ||||| ||||| |||| ||| || ||||||
Sbjct 71919 AAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 71885
>seq11
Length=650437
Score = 105 bits (116), Expect = 5e-18
Identities = 168/241 (70%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| ||||| || || ||||| | || || || ||||| |||||||| ||
Sbjct 621989 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 622048
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
||| |||| ||||||| ||||| || ||||| | ||||| | ||||| || |||
Sbjct 622049 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGG 622108
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| || ||| || ||| | || || || || | ||| ||
Sbjct 622109 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 622168
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAATAAAT 15189
|| || || ||||| ||||| |||| ||| || || || | | || | ||| ||||| |
Sbjct 622169 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAGCTGTACAAAATTGGAATAAGT 622228
Query 15190 T 15190
|
Sbjct 622229 T 622229
>seq35
Length=809
Score = 82.4 bits (90), Expect = 5e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 15014 TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTC 15073
|||| ||||||| ||||| || ||||| | ||||| | |||||||| ||| || |
Sbjct 7 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATAC 66
Query 15074 CTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTA 15133
|||||||||| ||| || || ||| | || ||||| || | ||| || || |
Sbjct 67 CTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 126
Query 15134 AGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15168
| || ||||| ||||| |||| ||| || ||||||
Sbjct 127 AAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357390854446955
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